Evidence map›Paper›PMID 19622748›Full record

ArticleThe Journal of biological chemistry2009

Leucyl-tRNA synthetase-dependent and -independent activation of a group I intron.

Michal T Boniecki, Seung Bae Rho, Mikhail Tukalo, Jennifer L Hsu, Eliana P Romero, Susan A Martinis

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 16 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. tRNA synthetase: tRNA aminoacylation and beyond.Wiley interdisciplinary reviews. RNA
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Michal T BonieckiDepartment of Biochemistry, University of Illinois, Urbana, Illinois 61801, USA.
Seung Bae Rho
Mikhail Tukalo
Jennifer L Hsu
Eliana P Romero
Susan A Martinis
University of Illinois Urbana-Champaign · US

Funding

tRNA Synthetase Fidelity MechanismsR01GM063789 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI MARTINIS, SUSAN A · 2001 to 2014
$3.3M
Leucyl-tRNA Synthetase Assisted Splicing MechanismsR01GM063107 · NIGMS · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI MARTINIS, SUSAN A · 2001 to 2005
$1.1M
NIGMS NIH HHS GM63107NIGMS NIH HHS R01 GM063107NIGMS NIH HHS R01 GM063789
6 · The paper itself

Abstract

Leucyl-tRNA synthetase (LeuRS) is an essential RNA splicing factor for yeast mitochondrial introns. Intracellular experiments have suggested that it works in collaboration with a maturase that is encoded within the bI4 intron. RNA deletion mutants of the large bI4 intron were constructed to identify a competently folded intron for biochemical analysis. The minimized bI4 intron was active in RNA splicing and contrasts with previous proposals that the canonical core of the bI4 intron is deficient for catalysis. The activity of the minimized bI4 intron was enhanced in vitro by the presence of the bI4 maturase or LeuRS.

Indexed as

Base SequenceBinding SitesDNA, FungalElectrophoresis, Polyacrylamide GelEndoribonucleasesGuanosineIntronsKineticsLeucine-tRNA LigaseMagnesiumMolecular Sequence DataMutationNucleic Acid ConformationNucleotidyltransferasesProtein BindingReverse Transcriptase Polymerase Chain ReactionDNA, FungalEndoribonucleasesGuanosineLeucine-tRNA LigaseMagnesiummRNA maturaseNucleotidyltransferasesSaccharomyces cerevisiae Proteins

Identifiers

PMID19622748
PMCPMC2785312
OpenAlexW2003052075

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.