Evidence map›Paper›PMID 19620283›Full record

ArticleMolecular and cellular biology2009

Evidence that the AAA+ proteins TIP48 and TIP49 bridge interactions between 15.5K and the related NOP56 and NOP58 proteins during box C/D snoRNP biogenesis.

Kenneth Scott McKeegan, Charles Maurice Debieux, Nicholas James Watkins

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 68 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Kenneth Scott McKeeganRNA Biology Group, ICaMB, University of Newcastle upon Tyne, Newcastle upon Tyne, UK.
Charles Maurice Debieux
Nicholas James Watkins
Newcastle University · GB

Funding

Biotechnology and Biological Sciences Research Council BB/F006853/1
6 · The paper itself

Abstract

The box C/D small nucleolar RNPs (snoRNPs) are essential for the processing and modification of rRNA. TIP48 and TIP49 are two related AAA(+) proteins that are essential for the formation of box C/D snoRNPs. These proteins are key components of the pre-snoRNP complexes, but their exact role in box C/D snoRNP biogenesis is largely uncharacterized. Here we report that TIP48 and TIP49 interact with one another in vitro, and only the TIP48/TIP49 complex, but not the individual proteins, possesses significant ATPase activity. Loss of TIP48 and TIP49 results in a change in pre-snoRNA levels and a loss of U3 snoRNA signal in the Cajal body. We show that TIP48 and TIP49 make multiple interactions with core snoRNP proteins and biogenesis factors and that these interactions are often regulated by the presence of ATP. Furthermore, we demonstrate that TIP48 and TIP49 efficiently bridge interactions between the core box C/D proteins NOP56 or NOP58 and 15.5K. Our data imply that the snoRNP assembly factor NUFIP can regulate the interactions between TIP48 and TIP49 and the core box C/D proteins. We suggest that snoRNP assembly involves an intricate series of interactions that are mediated/regulated by bridging factors and chaperones.

Indexed as

Adenosine TriphosphateATPases Associated with Diverse Cellular ActivitiesBase SequenceCarrier ProteinsCoiled BodiesDNA HelicasesHeLa CellsHumansHydrolysisModels, BiologicalMolecular Sequence DataMutationNuclear ProteinsProtein BindingProtein TransportRibonucleoproteins, Small NuclearAdenosine TriphosphateATPases Associated with Diverse Cellular ActivitiesCarrier ProteinsDNA HelicasesNOP56 protein, humanNOP58 protein, humanNuclear ProteinsRibonucleoproteins, Small NuclearRibonucleoproteins, Small NucleolarRNA PrecursorsRNA, Small NucleolarRNA, U3 small nucleolarRUVBL1 protein, humanRUVBL2 protein, humanSnu13 protein, human

Identifiers

PMID19620283
PMCPMC2738292
OpenAlexW2120720579

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.