Evidence map›Paper›PMID 19617690›Full record

ArticleCytogenetic and genome research2009

Constitutional haploinsufficiency of tumor suppressor genes in mentally retarded patients with microdeletions in 17p13.1.

A C V Krepischi-Santos, D Rajan, I K Temple, V Shrubb, J A Crolla, S Huang, S Beal, P A Otto, N P Carter, A M Vianna-Morgante and 1 more

Open access · bronzeAbstract readCase Reports
In one paragraph

Article in Cytogenetic and genome research, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 35 citations in OpenAlex.

  1. A Complex Chromosome Rearrangement DisruptingCase reports in genetics · 2025
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  2. A germline chimeric KANK1-DMRT1 transcript derived from a complex structural variant is associated with a congenital heart defect segregating across five generations.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 8 institutions in 2 countries.

A C V Krepischi-SantosDepartment of Genetics and Evolutionary Biology, Institute of Biosciences, University of São Paulo, São Paulo, Brazil.
D Rajan
I K Temple
V Shrubb
J A Crolla
S Huang
S Beal
P A Otto
N P Carter
A M Vianna-Morgante
C Rosenberg
Salisbury District Hospital · GBUniversidade de São Paulo · BRWellcome Sanger Institute · GBAC Camargo Hospital · BRHospital São Paulo · BRSussex Community NHS Foundation Trust · GBUniversity of Southampton · GBWessex Regional Genetics Laboratory · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chromosome microdeletions or duplications are detected in 10-20% of patients with mental impairment and normal karyotypes. A few cases have been reported of mental impairment with microdeletions comprising tumor suppressor genes. By array-CGH we detected 4 mentally impaired individuals carrying de novo microdeletions sharing an overlapping segment of approximately 180 kb in 17p13.1. This segment encompasses 18 genes, including 3 involved in cancer, namely KCTD11/REN, DLG4/PSD95, and GPS2. Furthermore, in 2 of the patients, the deletions also included TP53, the most frequently inactivated gene in human cancers. The 3 tumor suppressor genes KCTD11, DLG4, and GPS2, in addition to the GABARAP gene, have a known or suspected function in neuronal development and are candidates for causing mental impairment in our patients. Among our 4 patients with deletions in 17p13.1, 3 were part of a Brazilian cohort of 300 mentally retarded individuals, suggesting that this segment may be particularly prone to rearrangements and appears to be an important cause (approximately 1%) of mental retardation. Further, the constitutive deletion of tumor suppressor genes in these patients, particularly TP53, probably confers a significantly increased lifetime risk for cancer and warrants careful oncological surveillance of these patients. Constitutional chromosome deletions containing tumor suppressor genes in patients with mental impairment or congenital abnormalities may represent an important mechanism linking abnormal phenotypes with increased risks of cancer.

Indexed as

Chromosome DeletionGenes, Tumor SuppressorAdaptor Proteins, Signal TransducingAdolescentApoptosis Regulatory ProteinsCell Cycle ProteinsChildChild, PreschoolChromosome MappingChromosomes, Human, Pair 17Comparative Genomic HybridizationDisks Large Homolog 4 ProteinFemaleGene DosageGenes, p53HumansAdaptor Proteins, Signal TransducingApoptosis Regulatory ProteinsCell Cycle ProteinsDisks Large Homolog 4 ProteinDLG4 protein, humanGABARAP protein, humanGPS2 protein, humanIntracellular Signaling Peptides and ProteinsKCTD11 protein, humanMembrane ProteinsMicrotubule-Associated ProteinsPotassium ChannelsTransferases

Identifiers

PMID19617690
PMCPMC2813804
OpenAlexW2048309982

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.