Evidence map›Paper›PMID 19617467›Full record

ArticleThe Journal of pharmacology and experimental therapeutics2009

A systematic analysis of predicted phosphorylation sites within the human pregnane X receptor protein.

Kristin Lichti-Kaiser, Dan Brobst, Chenshu Xu, Jeff L Staudinger

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in The Journal of pharmacology and experimental therapeutics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
6.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 56 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Review
  6. Review
  7. Review
  8. Article
  9. Article
  10. Review
  11. Regulation of PXR and CAR by protein-protein interaction and signaling crosstalk.Expert opinion on drug metabolism & toxicology · 2016
    Review
  12. Small-molecule modulators of PXR and CAR.Biochimica et biophysica acta · 2016
    Review
  13. A SUMO-acetyl switch in PXR biology.Biochimica et biophysica acta · 2016
    Article
  14. Article
  15. SUMOylation and Ubiquitylation Circuitry Controls Pregnane X Receptor Biology in Hepatocytes.Drug metabolism and disposition: the biological fate of chemicals · 2015
    Article
  16. Article
  17. Article
  18. Pregnane X receptor and drug-induced liver injury.Expert opinion on drug metabolism & toxicology · 2014
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Kristin Lichti-KaiserDepartment of Pharmacology and Toxicology, University of Kansas, Lawrence, 66045, USA.
Dan Brobst
Chenshu Xu
Jeff L Staudinger
University of Kansas · US

Funding

Cell Signaling, PXR Phosphorylation &Drug DispositionR01DK068443 · NIDDK · UNIVERSITY OF KANSAS LAWRENCE · PI STAUDINGER, JEFFREY L · 2005 to 2009
$1.3M
NIDDK NIH HHS DK068443NIDDK NIH HHS R01 DK068443
6 · The paper itself

Abstract

The pregnane X receptor (PXR, NR1I2) regulates the expression of genes that encode drug-metabolizing enzymes and drug transporter proteins in liver and intestine. Understanding the molecular mechanisms that modulate PXR activity is therefore critical for the development of effective therapeutic strategies. Several recent studies have implicated the activation of kinase signaling pathways in the regulation of PXR biological activity, although direct evidence and molecular mechanisms are currently lacking. We therefore sought to characterize potential phosphorylation sites within the PXR protein by use of a rational, comprehensive, and systematic site-directed mutagenesis approach to generate phosphomimetic mutations (Ser/Thr --> Asp) and phospho-deficient mutations (Ser/Thr --> Ala) at 18 predicted consensus kinase recognition sequences in the human PXR protein. Here, we identify amino acid residues Ser8, Thr57, Ser208, Ser305, Ser350, and Thr408 as being critical for biological activity of the PXR protein. Mutations at positions 57 and 408 abolish ligand-inducible PXR activity. Mutations in the extreme N terminus and in the PXR ligand-binding domain at positions Ser8, Ser305, Ser350, and Thr408 decrease the ability of PXR to form heterodimers with retinoid X receptor alpha. Mutations at positions Ser208, Ser305, Ser350, and Thr408 alter PXR-protein cofactor interactions. Finally, the subcellular localization of the PXR protein is profoundly affected by mutations at position Thr408. These data suggest that PXR activity can potentially be regulated by phosphorylation at specific amino acid residues within several predicted consensus kinase recognition sequences to differentially affect PXR biological activity.

Indexed as

Amino Acid SubstitutionBinding SitesConsensus SequenceDimerizationGenes, ReporterHumansMolecular MimicryMutagenesis, Site-DirectedPhosphoproteinsPhosphorylationPredictive Value of TestsPregnane X ReceptorProtein Structure, TertiaryReceptors, SteroidTranscription FactorsNR1I2 protein, humanPhosphoproteinsPregnane X ReceptorReceptors, SteroidTranscription Factors

Identifiers

PMID19617467
PMCPMC2766221
OpenAlexW2139144456

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.