Evidence map›Paper›PMID 19617393›Full record

ArticleEukaryotic cell2009

Downregulation of mitochondrial porin inhibits cell growth and alters respiratory phenotype in Trypanosoma brucei.

Ujjal K Singha, Shvetank Sharma, Minu Chaudhuri

Open access · diamondAbstract read
In one paragraph

Article in Eukaryotic cell, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. Review
  3. Intracellular CaInternational journal of molecular sciences · 2021
    Review
  4. Article
  5. Isolation and Characterization of Acidocalcisomes from Trypanosomatids.Methods in molecular biology (Clifton, N.J.) · 2020
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. HJournal of bioenergetics and biomembranes · 2017
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Ujjal K SinghaDepartment of Microbial Pathogenesis and Immune Response, Meharry Medical College, Nashville, TN 37208, USA.
Shvetank Sharma
Minu Chaudhuri
Meharry Medical College · US

Funding

THE MOLECULAR BASIS OF BARTONELLA BACILLIFORMIS PATHOGENICITYS06GM008037 · NIGMS · MEHARRY MEDICAL COLLEGE · PI RUCKER, HUBERT K. · 1989 to 2007
$17.5M
Mitochondrial Protein Import in Trypanosoma bruceiSC1GM081146 · NIGMS · MEHARRY MEDICAL COLLEGE · PI CHAUDHURI, MINU · 2007 to 2014
$2.6M
NIGMS NIH HHS 1SC1GM081146NIGMS NIH HHS 3S06GM08037-30S1NIGMS NIH HHS S06 GM008037NIGMS NIH HHS SC1 GM081146
6 · The paper itself

Abstract

Porin is the most abundant outer membrane (OM) protein of mitochondria. It forms the aqueous channel on the mitochondrial OM and mediates major metabolite flux between mitochondria and cytosol. Mitochondrial porin in Trypanosoma brucei, a unicellular parasitic protozoan and the causative agent of African trypanosomiasis, possesses a beta-barrel structure similar to the bacterial OM porin OmpA. T. brucei porin (TbPorin) is present as a monomer as well as an oligomer on the mitochondrial OM, and its expression is developmentally regulated. In spite of its distinct structure, the TbPorin function is similar to those of other eukaryotic porins. TbPorin RNA interference (RNAi) reduced cell growth in both procyclic and bloodstream forms. The depletion of TbPorin decreased ATP production by inhibiting metabolite flux through the OM. Additionally, the level of trypanosome alternative oxidase (TAO) decreased, whereas the levels of cytochrome-dependent respiratory complexes III and IV increased in TbPorin-depleted mitochondria. Furthermore, the depletion of TbPorin reduced cellular respiration via TAO, which is not coupled with oxidative phosphorylation, but increased the capacity for cyanide-sensitive respiration. Together, these data reveal that TbPorin knockdown reduced the mitochondrial ATP level, which in turn increased the capacity of the cytochrome-dependent respiratory pathway (CP), in an attempt to compensate for the mitochondrial energy crisis. However, a simultaneous decrease in the substrate-level phosphorylation due to TbPorin RNAi caused growth inhibition in the procyclic form. We also found that the expressions of TAO and CP proteins are coordinately regulated in T. brucei according to mitochondrial energy demand.

Indexed as

Down-RegulationAmino Acid SequenceAnimalsCell RespirationGene Expression Regulation, DevelopmentalMolecular Sequence DataOxidoreductasesProtozoan ProteinsSequence AlignmentTrypanosoma brucei bruceiVoltage-Dependent Anion Channelsduroquinol oxidaseOxidoreductasesProtozoan ProteinsVoltage-Dependent Anion Channels

Identifiers

PMID19617393
PMCPMC2747824
OpenAlexW2097979902

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.