ArticleApplied and environmental microbiology2009
Identification of Yersinia enterocolitica at the species and subspecies levels by Fourier transform infrared spectroscopy.
Article in Applied and environmental microbiology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.
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Who cites it
25 citing papers in PubMed.
- Identification ofMicroorganisms · 2024Article
- Bacterial discrimination by Fourier transform infrared spectroscopy, MALDI-mass spectrometry and whole-genome sequencing.Future microbiology · 2024Article
- A multi-center validation study on the discrimination ofFrontiers in microbiology · 2023Article
- A global overview of the most important zoonotic bacteria pathogens transmitted fromInfectious medicine · 2022Review
- First isolation of Arcanobacterium pinnipediorum from a grey seal pup (Halichoerus grypus) in the UK.Folia microbiologica · 2022Article
- Bifidobacteria Strain Typing by Fourier Transform Infrared Spectroscopy.Frontiers in microbiology · 2021Article
- Fourier transform infrared spectroscopy: unlocking fundamentals and prospects for bacterial strain typing.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2019Review
- Fourier-Transform Infrared (FTIR) Spectroscopy for Typing of ClinicalFrontiers in microbiology · 2019Article
- Fourier-Transform InfraRed Spectroscopy Can Quickly Type Gram-Negative Bacilli Responsible for Hospital Outbreaks.Frontiers in microbiology · 2019Article
- Typing and Species Identification of Clinical Klebsiella Isolates by Fourier Transform Infrared Spectroscopy and Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry.Journal of clinical microbiology · 2018Article
- Further characteristics of Arcanobacterium pinnipediorum DSM 28752Folia microbiologica · 2018Article
- Identification of Escherichia coli and Trueperella pyogenes isolated from the uterus of dairy cows using routine bacteriological testing and Fourier transform infrared spectroscopy.Acta veterinaria Scandinavica · 2016Article
- Approved and novel strategies in diagnostics of rat bite fever and other Streptobacillus infections in humans and animals.Virulence · 2016Review
- Genome Wide Search for Biomarkers to Diagnose Yersinia Infections.Indian journal of microbiology · 2015Article
- Homogeneous Nature of Malaysian Marine Fish Epinephelus fuscoguttatus (Perciformes; Serranidae): Evidence Based on Molecular Markers, Morphology and Fourier Transform Infrared Analysis.International journal of molecular sciences · 2015Article
- Detection of Yersinia enterocolitica in food: an overview.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2015Review
- Outbreak with clonally related isolates of Corynebacterium ulcerans in a group of water rats.BMC microbiology · 2015Article
- Article
- Identification of Trueperella pyogenes isolated from bovine mastitis by Fourier transform infrared spectroscopy.PloS one · 2014Article
- Diverse high-risk B2 and D Escherichia coli clones depicted by Fourier Transform Infrared Spectroscopy.Scientific reports · 2013Article
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4 authors.
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Abstract
Yersinia enterocolitica and other Yersinia species, such as Y. pseudotuberculosis, Y. bercovieri, and Y. intermedia, were differentiated using Fourier transform infrared spectroscopy (FT-IR) combined with artificial neural network analysis. A set of well defined Yersinia strains from Switzerland and Germany was used to create a method for FT-IR-based differentiation of Yersinia isolates at the species level. The isolates of Y. enterocolitica were also differentiated by FT-IR into the main biotypes (biotypes 1A, 2, and 4) and serotypes (serotypes O:3, O:5, O:9, and "non-O:3, O:5, and O:9"). For external validation of the constructed methods, independently obtained isolates of different Yersinia species were used. A total of 79.9% of Y. enterocolitica sensu stricto isolates were identified correctly at the species level. The FT-IR analysis allowed the separation of all Y. bercovieri, Y. intermedia, and Y. rohdei strains from Y. enterocolitica, which could not be differentiated by the API 20E test system. The probability for correct biotype identification of Y. enterocolitica isolates was 98.3% (41 externally validated strains). For correct serotype identification, the probability was 92.5% (42 externally validated strains). In addition, the presence or absence of the ail gene, one of the main pathogenicity markers, was demonstrated using FT-IR. The probability for correct identification of isolates concerning the ail gene was 98.5% (51 externally validated strains). This indicates that it is possible to obtain information about genus, species, and in the case of Y. enterocolitica also subspecies type with a single measurement. Furthermore, this is the first example of the identification of specific pathogenicity using FT-IR.
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