Evidence map›Paper›PMID 19617005›Full record

ArticleDNA repair2009

TREX1 acts in degrading damaged DNA from drug-treated tumor cells.

Chuan-Jen Wang, Wing Lam, Scott Bussom, Hua-Mei Chang, Yung-Chi Cheng

Open access · greenAbstract read
In one paragraph

Article in DNA repair, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
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  3. Article
  4. Article
  5. Article
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  8. Article
  9. Review
  10. Review
  11. TREX1 as a Novel Immunotherapeutic Target.Frontiers in immunology · 2021
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Association of nuclear annexin A1 with prognosis of patients with esophageal squamous cell carcinoma.International journal of clinical and experimental pathology · 2014
    Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Chuan-Jen WangDepartment of Pharmacology, Yale University School of Medicine, New Haven, CT 06520, USA.
Wing Lam
Scott Bussom
Hua-Mei Chang
Yung-Chi Cheng
Yale University · US

Funding

Yale Liver CenterP30DK034989 · NIDDK · YALE UNIVERSITY · PI YASUKO IWAKIRI · 1986 to 2026
$31.1M
BIOCHEMICAL PHARMACOLOGY OF ANTIHIV COMPOUNDSR01AI038204 · NIAID · YALE UNIVERSITY · PI CHENG, YUNG-CHI · 1995 to 2014
$5.2M
NUCLEOSIDE ANALOGS AS ANTICANCER COMPOUNDSR01CA063477 · NCI · YALE UNIVERSITY · PI CHENG, YUNG-CHI · 1996 to 2007
$2.4M
Nucleoside Analogs as Anticancer CompoundsU01CA063477 · NCI · YALE UNIVERSITY · PI CHENG, YUNG-CHI · 2008 to 2010
$1.9M
NCI NIH HHS CA-63477NCI NIH HHS R01 CA063477NCI NIH HHS U01 CA063477NIAID NIH HHS R01 AI038204NIAID NIH HHS R56 AI038204NIDDK NIH HHS DK P30-34989
6 · The paper itself

Abstract

The major mammalian exonuclease TREX1 has been proposed to play a role in DNA repair and drug resistance. However, no cellular evidence substantiates this claim. Recent reports indicate TREX1's involvement in autoimmunity. To further understand its role, we studied TREX1 expression and functionality in anticancer drug-treated tumor cells. We report that the expression and localization of TREX1 are cell-type dependent. Camptothecin and other DNA damaging agents induced both TREX1 protein and its mRNA in a dose- and time-dependent manner. Using a TREX1-inducible cell line, we performed clonogenic assays and found no change in sensitivity of the cells to the agents upon TREX1 induction, suggesting that TREX1 may not play a role in DNA repair or drug sensitivity. Nevertheless, TREX1 serves as a key enzyme in the degradation of DNA from dying cells leading to less cellular DNA. Ubiquitously expressed in normal tissues, TREX1 may act in degrading DNA in all cell types undergoing a dying process before phagocytosis occurs.

Indexed as

DNA DamageAntineoplastic AgentsApoptosisCamptothecinCell Line, TumorDNADNA RepairExodeoxyribonucleasesGene Expression Regulation, NeoplasticHumansNeoplasmsPhosphoproteinsProtein TransportRNA, MessengerAntineoplastic AgentsCamptothecinDNAExodeoxyribonucleasesPhosphoproteinsRNA, Messengerthree prime repair exonuclease 1

Identifiers

PMID19617005
PMCPMC3640554
OpenAlexW1995045490

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.