Evidence map›Paper›PMID 19615375›Full record

ArticleJournal of molecular and cellular cardiology2009

Transcriptional remodeling of rapidly stimulated HL-1 atrial myocytes exhibits concordance with human atrial fibrillation.

Lisa C Mace, Liudmila V Yermalitskaya, Yajun Yi, Zhenjiang Yang, Ashley M Morgan, Katherine T Murray

Open access · greenAbstract read
In one paragraph

Article in Journal of molecular and cellular cardiology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
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  5. Article
  6. Article
  7. Article
  8. MulticellularFrontiers in cardiovascular medicine · 2020
    Review
  9. Article
  10. Article
  11. Azithromycin Causes a Novel Proarrhythmic Syndrome.Circulation. Arrhythmia and electrophysiology · 2017
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Quantitative Imaging of Preamyloid Oligomers, a Novel Structural Abnormality, in Human Atrial Samples.The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society · 2014
    Article
  18. Article
  19. Article
  20. Small heat shock proteins in redox metabolism: implications for cardiovascular diseases.The international journal of biochemistry & cell biology · 2012
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Lisa C MaceDepartment of Medicine, Vanderbilt University School of Medicine, Nashville, TN 37232-6602, USA.
Liudmila V Yermalitskaya
Yajun Yi
Zhenjiang Yang
Ashley M Morgan
Katherine T Murray
Vanderbilt University · US

Funding

Tumor Immunology and Microenvironment Research ProgramP30CA068485 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI MATTHEW J TYSKA · 1995 to 2026
$172.8M
Translational Analysis CoreP30DK058404 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI RICHARD M. PEEK · 2002 to 2026
$29.9M
TRANSGENIC MOUSE/ ES CELL SHARES RESOURCESP60DK020593 · NIDDK · VANDERBILT UNIVERSITY · PI MCGUINNESS, OWEN P · 1986 to 2011
$28.1M
Shop Module CoreP30EY008126 · NEI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Kevin L Schey · 1989 to 2026
$19.6M
Preamyloid Oligomers and Susceptibility to Atrial FibrillationR01HL096844 · NHLBI · VANDERBILT UNIVERSITY · PI MURRAY, KATHERINE T · 2010 to 2014
$1.9M
A Molecular Target for Atrial FibrillationR01HL071002 · NHLBI · VANDERBILT UNIVERSITY · PI MURRAY, KATHERINE T · 2003 to 2007
$1.9M
Training Program in Cardiovascular PharmacologyT32HL076133 · NHLBI · VANDERBILT UNIVERSITY · PI BARNETT, JOEY VICTOR · 2004 to 2008
$1.1M
STRUCTURAL INVESTIGATIONS BY NUCLEAR MAGNETIC RESONANCEZ01HL001002 · NHLBI · HEART, LUNG, AND BLOOD INSTITUTE · PI SOKOLOSKI, E A · 1986 to 1992
–
NCI NIH HHS P30 CA068485NCI NIH HHS P30 CA68485NEI NIH HHS P30 EY008126NEI NIH HHS P30 EY08126NHLBI NIH HHS 1 P01 HL6744-01NHLBI NIH HHS HL076133NHLBI NIH HHS HL1002NHLBI NIH HHS R01 HL071002NHLBI NIH HHS R01 HL096844NHLBI NIH HHS T32 HL076133NIDDK NIH HHS P30 DK058404NIDDK NIH HHS P30 DK58404NIDDK NIH HHS P60 DK020593NIDDK NIH HHS P60 DK20593
6 · The paper itself

Abstract

During atrial fibrillation (AF), rapid stimulation causes atrial remodeling that increases arrhythmia susceptibility. Using an established atrial (HL-1) myocyte model, we investigated the transcriptional profile associated with early atrial myocyte remodeling. Spontaneously contracting HL-1 cells were cultured in the absence and presence of rapid stimulation for 24 h and RNA harvested for microarray analysis. We identified 758 genes that were significantly altered with rapid stimulation (626 up- and 132 down-regulated). Results were confirmed using real-time quantitative RT-PCR for selected genes based on physiological relevance in human AF and/or experimental atrial tachycardia (AT), and regulation in the microarray results. In some cases, transcriptional changes were rapid, occurring within 3 h. For a selected group of genes, results were validated for the expressed protein, with findings that correlated with observed transcriptional changes. Significantly regulated genes were classified using the Gene Ontology Database to permit direct comparison of our findings with previously published myocardial transcriptional profiles. For broad functional categories, there was strong concordance between rapidly stimulated HL-1 myocytes and human AF, but not for other remodeling paradigms (cardiomyopathy and exercise). Many individual gene changes were conserved with AF/AT, with marked up-regulation of genes encoding brain and atrial natriuretic peptide precursors, and heat shock proteins. For the conserved genes, both a cellular stress and survival response was evident. Our results demonstrate similarities with human AF/experimental AT with respect to large-scale patterns of transcriptional remodeling, as well as regulation of specific individual genes. Importantly, we identified novel pathways and molecules that were concordantly regulated in vivo.

Indexed as

Transcription, GeneticAtrial FibrillationConserved SequenceGene Expression ProfilingGene Expression RegulationHeart AtriaHumansMultigene FamilyMyocytes, CardiacOligonucleotide Array Sequence AnalysisReproducibility of ResultsReverse Transcriptase Polymerase Chain ReactionRNA, MessengerTachycardiaTime FactorsRNA, Messenger

Identifiers

PMID19615375
PMCPMC2754068
OpenAlexW1976668265

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.