Evidence map›Paper›PMID 19609446›Full record

ArticlePloS one2009

CTLA4 autoimmunity-associated genotype contributes to severe pulmonary tuberculosis in an African population.

Thorsten Thye, Genevieve Scarisbrick, Edmund N L Browne, Margaret Amanua Chinbuah, John Gyapong, Ivy Osei, Ellis Owusu-Dabo, Stefan Niemann, Sabine Rüsch-Gerdes, Christian G Meyer and 1 more

Abstract read
In one paragraph

Article in PloS one, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Association of Cytotoxic T-Lymphocyte Antigen-4 (International journal of molecular sciences · 2024
    Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Genetics and evolution of tuberculosis pathogenesis: New perspectives and approaches.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2020
    Review
  9. Article
  10. Immunity and Immunopathology in the Tuberculous Granuloma.Cold Spring Harbor perspectives in medicine · 2014
    Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Thorsten ThyeDepartment of Molecular Medicine, Bernhard Nocht Institute for Tropical Medicine, Hamburg, Germany.
Genevieve Scarisbrick
Edmund N L Browne
Margaret Amanua Chinbuah
John Gyapong
Ivy Osei
Ellis Owusu-Dabo
Stefan Niemann
Sabine Rüsch-Gerdes
Christian G Meyer
Rolf D Horstmann

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The gene of Cytotoxic T Lymphocyte-associated Antigen 4 (CTLA4), a negative regulator of T lymphocytes, contains a single-nucleotide polymorphism (SNP) at position +6230A->G (ct60A->G), which has been found associated with several autoimmune diseases and appears to reduce T-cell inhibitory activity. In Ghana, West Africa, we compared the frequencies of CTLA4 +6230 A/G and 6 haplotype-tagging SNPs in 2010 smear-positive, HIV-negative patients with pulmonary tuberculosis (TB) and 2346 controls matched for age, gender and ethnicity. We found no difference in allele frequencies between cases and controls. However, +6230A and a distinct CTLA4 haplotype and a diplotype comprising the +6230A allele were significantly less frequent among cases with large opacities in chest radiographs compared to those with small ones (P(corrected [cor]) = 0.002, P(cor) = 0.00045, P = 0.0005, respectively). This finding suggests that an increased T-cell activity associated with the CTLA4 +6230G allele contributes to pathology rather than to protection in pulmonary TB.

Indexed as

Antigens, CDAutoimmune DiseasesBase SequenceCase-Control StudiesCTLA-4 AntigenDNA PrimersGenotypeGhanaHaplotypesHumansPolymorphism, Single NucleotideTuberculosis, PulmonaryAntigens, CDCTLA-4 AntigenCTLA4 protein, humanDNA Primers

Identifiers

PMID19609446
PMCPMC2707621

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.