Evidence map›Paper›PMID 19605915›Full record

ArticleVeterinary pathology2009

A data-capture tool for mouse pathology phenotyping.

B A Sundberg, P N Schofield, M Gruenberger, J P Sundberg

Abstract read
In one paragraph

Article in Veterinary pathology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Genetic determinants of fibro-osseous lesions in aged inbred mice.Experimental and molecular pathology · 2016
    Article
  7. Article
  8. Article
  9. Training pathologists in mouse pathology.Veterinary pathology · 2012
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Where's the mouse info?Veterinary pathology · 2009
    Article
  15. A mouse by any other name ...The Journal of investigative dermatology · 2009
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

B A SundbergThe Jackson Laboratory, Bar Harbor, ME 04609-1500, USA.
P N Schofield
M Gruenberger
J P Sundberg

Funding

Shared Resource ManagementP30CA034196 · NCI · JACKSON LABORATORY · PI Paul Robson · 1985 to 2026
$61.9M
Mouse Models of Human Cancer DatabaseR01CA089713 · NCI · JACKSON LABORATORY · PI BULT, CAROL J · 2002 to 2025
$17.5M
Shock Center for Aging Research at The Jackson Laborato*P30AG025707 · NIA · JACKSON LABORATORY · PI PAIGEN, BEVERLY J · 2005 to 2009
$4.1M
Pathology of the Laboratory MouseR13RR017436 · NCRR · JACKSON LABORATORY · PI SUNDBERG, JOHN PAUL · 2007 to 2011
$100k
NCI NIH HHS CA34196NCI NIH HHS CA89713NCI NIH HHS P30 CA034196NCI NIH HHS R01 CA089713NCRR NIH HHS R13 RR017436NIA NIH HHS AG025707NIA NIH HHS P30 AG025707
6 · The paper itself

Abstract

The Mouse Disease Information System is a free Microsoft Access database (http://research.jax.org/faculty/sundberg/index.html) designed by veterinary pathologists to aid veterinary pathologists in data acquisition, analysis, and coordination of tissue-sample archives. Linking the system to the Mouse Anatomy and Mouse Pathology Ontologies provides controlled vocabulary (and spelling) for organ, tissue, and diagnosis. Severity scores provide a quantitative assessment of all lesions to enable quantitative trait locus analysis for large-scale studies. Individual diagnoses can be verified for their definition by online linkage to Pathbase.net. Histologic images can be accessed from Pathbase by using the Mouse Pathology Ontology directly for comparison with slides being viewed at the time of data entry and providing the user with a reference and a "virtual second opinion."

Indexed as

Databases, FactualPathology, VeterinaryAnimalsLaboratory Animal ScienceMiceUser-Computer Interface

Identifiers

PMID19605915
PMCPMC2879151

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.