Evidence map›Paper›PMID 19605490›Full record

ArticleJournal of virology2009

Identification of ongoing human immunodeficiency virus type 1 (HIV-1) replication in residual viremia during recombinant HIV-1 poxvirus immunizations in patients with clinically undetectable viral loads on durable suppressive highly active antiretroviral therapy.

Carlum Shiu, Coleen K Cunningham, Thomas Greenough, Petronella Muresan, Victor Sanchez-Merino, Vincent Carey, J Brooks Jackson, Carrie Ziemniak, Lawrence Fox, Marvin Belzer and 4 more

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 47 citations in OpenAlex.

  1. Trial
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Review
  9. Review
  10. HIV-1 Reservoirs During Suppressive Therapy.Trends in microbiology · 2016
    Review
  11. Review
  12. Animal Models for HIV Cure Research.Frontiers in immunology · 2016
    Review
  13. Article
  14. Article
  15. Observational
  16. Article
  17. Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 1 country.

Carlum ShiuJohns Hopkins University, Baltimore, MD 21287, USA.
Coleen K Cunningham
Thomas Greenough
Petronella Muresan
Victor Sanchez-Merino
Vincent Carey
J Brooks Jackson
Carrie Ziemniak
Lawrence Fox
Marvin Belzer
Stuart C Ray
Katherine Luzuriaga
Deborah Persaud
Pediatric AIDS Clinical Trials Group P1059 Team
Johns Hopkins University · USUniversity of Massachusetts Chan Medical School · USChildren's Hospital of Los Angeles · USDuke Medical Center · USNational Institutes of Health · US

Funding

HIV Vaccines on Latent Reservoirs in Young Adults on HAARTR01AI062446 · NIAID · JOHNS HOPKINS UNIVERSITY · PI PERSAUD, DEBORAH · 2006 to 2008
$1.2M
NICHD INTERNATIONAL PEDIATRIC AND PERINATAL HIV STUDIES NETWORK COORDI-275033345N01HD033345 · NICHD · WESTAT · PI NESEL, CAROL · 2004 to 2006
–
NIAID NIH HHS R01 AI062446NICHD NIH HHS N01-HD-3-3345PHS HHS R01 32391PHS HHS R01 A1062446PHS HHS R01 A155312PHS HHS U01 A1068632
6 · The paper itself

Abstract

In most human immunodeficiency virus type 1 (HIV-1)-infected individuals who achieve viral loads of <50 copies/ml during highly active antiretroviral therapy (HAART), low levels of plasma virus remain detectable for years by ultrasensitive methods. The relative contributions of ongoing virus replication and virus production from HIV-1 reservoirs to persistent low-level viremia during HAART remain controversial. HIV-1 vaccination of HAART-treated individuals provides a model for examining low-level viremia, as immunizations may facilitate virus replication and sequence evolution. In a phase 1 trial of modified vaccinia virus Ankara/fowlpox virus-based HIV-1 vaccines in 20 HIV-infected young adults receiving HAART, we assessed the prevalence of low-level viremia and sequence evolution, using ultrasensitive viral load (<6.5 copies/ml) and genotyping (five-copy sensitivity) assays. Viral evolution, consisting of new drug resistance mutations and novel amino acid changes within a relevant HLA-restricted allele (e.g., methionine, isoleucine, glutamine, or arginine for leucine at position 205 of RT), was found in 1 and 3 of 20 subjects, respectively. Sequence evolution was significantly correlated with levels of viremia of between 6.5 and <50 copies/ml (P = 0.03) and was more likely to occur within epitopes presented by relevant HLA alleles (P < 0.001). These findings suggest that ongoing virus replication contributes to low-level viremia in patients on HAART and that this ongoing replication is subject to CD8(+) T-cell selective pressures.

Indexed as

AdultAnti-Retroviral AgentsAntiretroviral Therapy, Highly ActiveCD4-Positive T-LymphocytesCD8-Positive T-LymphocytesCohort StudiesFemaleGenotypeHIV-1HIV InfectionsHumansImmunizationMalePoxviridaeSequence Analysis, DNAAnti-Retroviral Agents

Identifiers

PMID19605490
PMCPMC2748010
OpenAlexW2104846025

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.