Evidence map›Paper›PMID 19604115›Full record

ArticleThe Journal of infectious diseases2009

Peptides of a novel Mycobacterium tuberculosis-specific cell wall protein for immunodiagnosis of tuberculosis.

Krishna K Singh, Naresh Sharma, Diana Vargas, Zhentong Liu, John T Belisle, Visalakshi Potharaju, Ajay Wanchu, Digambar Behera, Suman Laal

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of infectious diseases, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 2 countries.

Krishna K SinghDepartment of Pathology, New York University School of Medicine, New York, NY 10010, USA.
Naresh Sharma
Diana Vargas
Zhentong Liu
John T Belisle
Visalakshi Potharaju
Ajay Wanchu
Digambar Behera
Suman Laal
Colorado State University · USLRS Institute of Tuberculosis and Respiratory Diseases · INNew York University · USPost Graduate Institute of Medical Education and Research · INVA NY Harbor Healthcare System · US

Funding

TRAINING PROGRAM IN TB AND HIV PREVENTION AND TREATMENTD43TW001409 · FIC · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI LAAL, SUMAN · 2000 to 2011
$4.6M
Antibody Based Diagnosis for TBR01AI056257 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI LAAL, SUMAN · 2003 to 2007
$2.0M
FIC NIH HHS D43 TW001409FIC NIH HHS TW001409NIAID NIH HHS AI-056257NIAID NIH HHS N01 AI040091NIAID NIH HHS R01 AI056257
6 · The paper itself

Abstract

The sequencing of the Mycobacterium tuberculosis genome revealed the existence of several genes encoding novel proteins with unknown functions, one of which is the proline-threonine repetitive protein (PTRP; Rv0538). Genomic studies of various mycobacterial species and M. tuberculosis clinical isolates demonstrate that ptrp is specific to the M. tuberculosis complex and ubiquitous in clinical isolates. Enzyme-linked immunosorbent assay, Western blot analysis, and electron microscopic evaluation of M. tuberculosis subcellular fractions and intact bacteria confirm that PTRP is a cell wall protein. Antibodies to PTRP are present in serum specimens from human immunodeficiency virus (HIV)-negative, tuberculosis (TB)-positive and HIV-positive, TB-positive patients but not purified protein derivative (PPD)-negative or PPD-positive healthy control subjects, demonstrating its diagnostic potential. Epitope mapping of PTRP delineated 4 peptides that can identify >80% of sputum smear-positive and >50% of smear-negative, HIV-negative, TB-positive patients and >80% of HIV-positive, TB-positive patients. These results demonstrate that immunodominant epitopes of carefully selected M. tuberculosis-specific proteins can be used to devise a simple peptide-based serodiagnostic test for TB.

Indexed as

Amino Acid SequenceAntibodies, BacterialAntigens, BacterialBacterial ProteinsCell WallCloning, MolecularGene Expression Regulation, BacterialGenome, BacterialHumansImmunodominant EpitopesImmunologic TestsMolecular Sequence DataMycobacterium tuberculosisTuberculosisAntibodies, BacterialAntigens, BacterialBacterial ProteinsImmunodominant Epitopes

Identifiers

PMID19604115
PMCPMC2846530
OpenAlexW2109225694

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.