Evidence map›Paper›PMID 19603966›Full record

ArticleThe Journal of chemical physics2009

The multiscale coarse-graining method. IV. Transferring coarse-grained potentials between temperatures.

Vinod Krishna, Will G Noid, Gregory A Voth

Abstract read
In one paragraph

Article in The Journal of chemical physics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Article
  2. Article
  3. Changing Your Martini Can Still Give You a Hangover.Journal of chemical theory and computation · 2024
    Article
  4. Article
  5. Coarse-Grained Modeling Using Neural Networks Trained on Structural Data.Journal of chemical theory and computation · 2023
    Article
  6. Article
  7. Article
  8. Bottom-up Coarse-Graining: Principles and Perspectives.Journal of chemical theory and computation · 2022
    Review
  9. Article
  10. Review
  11. Temperature and Phase Transferable Bottom-up Coarse-Grained Models.Journal of chemical theory and computation · 2020
    Article
  12. Article
  13. Highly Coarse-Grained Representations of Transmembrane Proteins.Journal of chemical theory and computation · 2017
    Article
  14. Article
  15. Article
  16. Multiscale simulation of microbe structure and dynamics.Progress in biophysics and molecular biology · 2011
    Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Vinod KrishnaDepartment of Chemistry and Center for Biophysical Modeling and Simulation, University of Utah, Salt Lake City, Utah 84112-0850, USA.
Will G Noid
Gregory A Voth

Funding

Multiscale investigation of lipid-protein interactionsF32GM076839 · NIGMS · UNIVERSITY OF UTAH · PI NOID, WILLIAM G · 2006 to 2007
$74k
NIGMS NIH HHS 5 F32 GM076839-02NIGMS NIH HHS F32 GM076839
6 · The paper itself

Abstract

This work develops a method for the construction of multiscale coarse-grained (MS-CG) force fields at different temperatures based on available atomistic data at a given reference temperature. The validity of this theory is demonstrated numerically by applying it to construct MS-CG models of the Lennard-Jones liquid and simple point charge water model systems.

Indexed as

Computer SimulationModels, TheoreticalTemperaturePhase TransitionWaterWater

Identifiers

PMID19603966
PMCPMC2721766

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.