Evidence map›Paper›PMID 19603522›Full record

ArticleGenes, chromosomes & cancer2009

Colocalization of somatic and meiotic double strand breaks near the Myc oncogene on mouse chromosome 15.

Siemon H Ng, Sarah A Maas, Petko M Petkov, Kevin D Mills, Kenneth Paigen

Open access · greenAbstract read
In one paragraph

Article in Genes, chromosomes & cancer, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.1field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Siemon H NgCenter for Genome Dynamics, The Jackson Laboratory, Bar Harbor, ME 04609, USA.
Sarah A Maas
Petko M Petkov
Kevin D Mills
Kenneth Paigen
Jackson Laboratory · US

Funding

Shared Resource ManagementP30CA034196 · NCI · JACKSON LABORATORY · PI William Carl Skarnes · 1985 to 2026
$61.9M
UNC and PERLEGEN, IncP50GM076468 · NIGMS · JACKSON LABORATORY · PI PETKOV, PETKO M · 2006 to 2015
$31.0M
Genomic Organization of Recombination Hot SpotsR01GM078643 · NIGMS · JACKSON LABORATORY · PI PAIGEN, KENNETH · 2006 to 2014
$2.7M
REPRODUCTIVE BIOLOGYT32HD007065 · NICHD · JACKSON LABORATORY · PI BRAUN, ROBERT E · 1985 to 2020
$2.6M
NCI NIH HHS CA34196NCI NIH HHS P30 CA034196NICHD NIH HHS T32 HD007065NIGMS NIH HHS GM076468-P5NIGMS NIH HHS GM078643NIGMS NIH HHS P50 GM076468NIGMS NIH HHS R01 GM078643
6 · The paper itself

Abstract

Both somatic and meiotic recombinations involve the repair of DNA double strand breaks (DSBs) that occur at preferred locations in the genome. Improper repair of DSBs during either mitosis or meiosis can lead to mutations, chromosomal aberration such as translocations, cancer, and/or cell death. Currently, no model exists that explains the locations of either spontaneous somatic DSBs or programmed meiotic DSBs or relates them to each other. One common class of tumorigenic translocations arising from DSBs is chromosomal rearrangements near the Myc oncogene. Myc translocations have been associated with Burkitt lymphoma in humans, plasmacytoma in mice, and immunocytoma in rats. Comparing the locations of somatic and meiotic DSBs near the mouse Myc oncogene, we demonstrated that the placement of these DSBs is not random and that both events clustered in the same short discrete region of the genome. Our work shows that both somatic and meiotic DSBs tend to occur in proximity to each other within the Myc region, suggesting that they share common originating features. It is likely that some regions of the genome are more susceptible to both somatic and meiotic DSBs, and the locations of meiotic hotspots may be an indicator of genomic regions more susceptible to DNA damage.

Indexed as

Chromosomes, MammalianDNA Breaks, Double-StrandedGenes, mycAnimalsFemaleLymphoma, B-CellMaleMeiosisMiceMice, Inbred C57BLMice, TransgenicMitosisProto-Oncogene Proteins c-mycRecombination, GeneticMyc protein, mouseProto-Oncogene Proteins c-myc

Identifiers

PMID19603522
PMCPMC2821716
OpenAlexW2084278329

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.