Evidence map›Paper›PMID 19603075›Full record

ArticlePloS one2009

Rapid evolution of virulence and drug resistance in the emerging zoonotic pathogen Streptococcus suis.

Matthew T G Holden, Heidi Hauser, Mandy Sanders, Thi Hoa Ngo, Inna Cherevach, Ann Cronin, Ian Goodhead, Karen Mungall, Michael A Quail, Claire Price and 25 more

Abstract read
In one paragraph

Article in PloS one, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 160 papers.

0numbers the graph read from it
0cells of the map it votes in
160citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

160 citing papers in PubMed.

  1. Article
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  5. TreC: A Critical Mediator of lysoPC-Induced Hypervirulence inTransboundary and emerging diseases · 2026
    Article
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  7. Virulence · 2025
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  11. Virulence · 2024
    Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. First WGS Characterization ofTransboundary and emerging diseases · 2024
    Article
  19. Techniques for Genetic Manipulation.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  20. Pathogens (Basel, Switzerland) · 2023
    Article

100 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

35 authors.

Matthew T G HoldenThe Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, United Kingdom. mh3@sanger.ac.uk
Heidi Hauser
Mandy Sanders
Thi Hoa Ngo
Inna Cherevach
Ann Cronin
Ian Goodhead
Karen Mungall
Michael A Quail
Claire Price
Ester Rabbinowitsch
Sarah Sharp
Nicholas J Croucher
Tran Bich Chieu
Nguyen Thi Hoang Mai
To Song Diep
Nguyen Tran Chinh
Michael Kehoe
James A Leigh
Philip N Ward
Christopher G Dowson
Adrian M Whatmore
Neil Chanter
Pernille Iversen
Marcelo Gottschalk
Josh D Slater
Hilde E Smith
Brian G Spratt
Jianguo Xu
Changyun Ye
Stephen Bentley
Barclay G Barrell
Constance Schultsz
Duncan J Maskell
Julian Parkhill

Funding

Biotechnology and Biological Sciences Research Council BB/G019274/1Wellcome Trust 089472
6 · The paper itself

Abstract

backgroundStreptococcus suis is a zoonotic pathogen that infects pigs and can occasionally cause serious infections in humans. S. suis infections occur sporadically in human Europe and North America, but a recent major outbreak has been described in China with high levels of mortality. The mechanisms of S. suis pathogenesis in humans and pigs are poorly understood. METHODOLOGY/PRINCIPAL

findingsThe sequencing of whole genomes of S. suis isolates provides opportunities to investigate the genetic basis of infection. Here we describe whole genome sequences of three S. suis strains from the same lineage: one from European pigs, and two from human cases from China and Vietnam. Comparative genomic analysis was used to investigate the variability of these strains. S. suis is phylogenetically distinct from other Streptococcus species for which genome sequences are currently available. Accordingly, approximately 40% of the approximately 2 Mb genome is unique in comparison to other Streptococcus species. Finer genomic comparisons within the species showed a high level of sequence conservation; virtually all of the genome is common to the S. suis strains. The only exceptions are three approximately 90 kb regions, present in the two isolates from humans, composed of integrative conjugative elements and transposons. Carried in these regions are coding sequences associated with drug resistance. In addition, small-scale sequence variation has generated pseudogenes in putative virulence and colonization factors. CONCLUSIONS/SIGNIFICANCE: The genomic inventories of genetically related S. suis strains, isolated from distinct hosts and diseases, exhibit high levels of conservation. However, the genomes provide evidence that horizontal gene transfer has contributed to the evolution of drug resistance.

Indexed as

AnimalsDisease OutbreaksDNA, BacterialDrug Resistance, MicrobialGenome, BacterialHumansPhylogenyStreptococcal InfectionsStreptococcus suisVirulenceZoonosesDNA, Bacterial

Identifiers

PMID19603075
PMCPMC2705793

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.