Evidence map›Paper›PMID 19603065›Full record

ArticleEuropean journal of human genetics : EJHG2010

DFNB79: reincarnation of a nonsyndromic deafness locus on chromosome 9q34.3.

Shahid Yar Khan, Saima Riazuddin, Mohsin Shahzad, Nazir Ahmed, Ahmad Usman Zafar, Atteeq Ur Rehman, Robert J Morell, Andrew J Griffith, Zubair M Ahmed, Sheikh Riazuddin and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in European journal of human genetics : EJHG, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
0.6field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 14 citations in OpenAlex.

  1. Telomere Length and Hearing Loss: A Two-Sample Mendelian Randomization.International journal of environmental research and public health · 2022
    Pooled it
  2. Review
  3. Article
  4. Article
  5. Review
  6. Next-generation sequencing in genetic hearing loss.Genetic testing and molecular biomarkers · 2013
    Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Shahid Yar KhanNational Center of Excellence in Molecular Biology, Punjab University, Lahore, Pakistan.
Saima Riazuddin
Mohsin Shahzad
Nazir Ahmed
Ahmad Usman Zafar
Atteeq Ur Rehman
Robert J Morell
Andrew J Griffith
Zubair M Ahmed
Sheikh Riazuddin
Thomas B Friedman
Centre of Excellence in Molecular Biology · PKCincinnati Children's Hospital Medical Center · USNational Institute on Deafness and Other Communication Disorders · USUniversity of the Punjab · PK

Funding

Identification of Genes Causing Syndromic And Nonsyndromic Hearing ImpairmentZIADC000039 · NIDCD · NATIONAL INSTITUTE ON DEAFNESS AND OTHER COMMUNICATION DISORDERS · PI FRIEDMAN, THOMAS · 2009 to 2025
$48.7M
Identification of Genes Causing Syndromic And Nonsyndromic Hearing ImpairmentZ01DC000039 · NIDCD · NATIONAL INSTITUTE ON DEAFNESS AND OTHER COMMUNICATION DISORDERS · PI FRIEDMAN, THOMAS BAER · 1997 to 2008
$7.2M
Clinical Analysis Of Disorders Of Hearing And BalanceZ01DC000064 · NIDCD · NATIONAL INSTITUTE ON DEAFNESS AND OTHER COMMUNICATION DISORDERS · PI GRIFFITH, ANDREW J · 2001 to 2008
$1.2M
Intramural NIH HHS Z01 DC000039Intramural NIH HHS Z01 DC000064NIDCD NIH HHS 1 ZO1 DC000039-12NIDCD NIH HHS ZO1 DC000064
6 · The paper itself

Abstract

Genetic analysis of an inbred Pakistani family PKDF280, segregating prelingual severe to profound sensorineural hearing loss, provided evidence for a DFNB locus on human chromosome 9q34.3. Co-segregation of the deafness trait with marker D9SH159 was determined by a two-point linkage analysis (LOD score 9.43 at theta=0). Two additional large families, PKDF517 and PKDF741, co-segregate recessive deafness with markers linked to the same interval. Haplotype analyses of these three families refined the interval to 3.84 Mb defined by D9S1818 (centromeric) and D9SH6 (telomeric). This interval overlaps with the previously reported DFNB33 locus whose chromosomal map position has been recently revised and assigned to a new position on chromosome 10p11.23-q21.1. The nonsyndromic deafness locus on chromosome 9q segregating in family PKDF280 was designated DFNB79. We are currently screening the 113 candidate DFNB79 genes for mutations and have excluded CACNA1B, EDF1, PTGDS, EHMT1, QSOX2, NOTCH1, MIR126 and MIR602.

Indexed as

AudiometryChromosomes, Human, Pair 9DeafnessFamilyFemaleGenetic LociGenetic MarkersHumansLod ScoreMalePedigreePhysical Chromosome MappingGenetic Markers

Identifiers

PMID19603065
PMCPMC2795002
OpenAlexW2015874019

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.