Evidence map›Paper›PMID 19602144›Full record

ArticleMolecular microbiology2009

The GacS/GacA signal transduction system of Pseudomonas aeruginosa acts exclusively through its control over the transcription of the RsmY and RsmZ regulatory small RNAs.

Anja Brencic, Kirsty A McFarland, Heather R McManus, Sandra Castang, Ilaria Mogno, Simon L Dove, Stephen Lory

Open access · greenAbstract read
In one paragraph

Article in Molecular microbiology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 222 papers.

0numbers the graph read from it
0cells of the map it votes in
222citing papers in PubMed
8.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

222 citing papers in PubMed, 376 citations in OpenAlex.

  1. Applied and environmental microbiology · 2026
    Article
  2. Bacterial-derived cyclic lipopeptides suppress dauer arrest inbioRxiv : the preprint server for biology · 2026
    Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Review
  14. Two cysteines control Tse1 secretion by H1-T6SS in Pseudomonas aeruginosa.Protein science : a publication of the Protein Society · 2025
    Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Review
  20. Article

162 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Anja BrencicDepartment of Microbiology and Molecular Genetics, Harvard Medical School, Boston, MA 02115, USA.
Kirsty A McFarland
Heather R McManus
Sandra Castang
Ilaria Mogno
Simon L Dove
Stephen Lory
Boston Children's Hospital · USHarvard University · USBoston University · US

Funding

P. aeruginosa Virulence DeterminantsR37AI021451 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI LORY, STEPHEN · 2005 to 2014
$4.0M
Transcription Regulation in Pseudomonas aeruginosaR01AI057754 · NIAID · BOSTON CHILDREN'S HOSPITAL · PI DOVE, SIMON L · 2006 to 2010
$1.8M
Phase-variable gene expression in Pseudomonas aeruginosaR01AI069007 · NIAID · BOSTON CHILDREN'S HOSPITAL · PI DOVE, SIMON L · 2006 to 2010
$1.8M
STUDIES OF P. AERUGINOSA VIRULENCE DETERMINANTSR01AI021451 · NIAID · UNIVERSITY OF WASHINGTON · PI LORY, STEPHEN · 1985 to 2004
$1.5M
NIAID NIH HHS AI021451NIAID NIH HHS AI057754NIAID NIH HHS AI069007NIAID NIH HHS R01 AI021451NIAID NIH HHS R01 AI057754NIAID NIH HHS R01 AI069007NIAID NIH HHS R37 AI021451
6 · The paper itself

Abstract

We report here the results of an analysis of the regulatory range of the GacS/GacA two-component system in Pseudomonas aeruginosa. Using microarrays, we identified a large number of genes that are regulated by the system, and detected a near complete overlap of these genes with those regulated by two small RNAs (sRNAs), RsmY and RsmZ, suggesting that the expression of all GacA-regulated genes is RsmY/Z-dependent. Using genome-wide DNA-protein interaction analyses, we identified only two genomic regions that associated specifically with GacA, located upstream of the rsmY and rsmZ genes. These results demonstrate that in P. aeruginosa, the GacS/GacA system transduces the regulatory signals to downstream genes exclusively by directly controlling the expression of only two genes rsmY and rsmZ. These two sRNAs serve as intermediates between the input signals and the output at the level of mRNA stability, although additional regulatory inputs can influence the levels of these two riboregulators. We show that the A+T-rich DNA segment upstream of rsmZ is bound and silenced by MvaT and MvaU, the global gene regulators of the H-NS family. This work highlights the importance of post-transcriptional mechanisms involving sRNAs in controlling gene expression during bacterial adaptation to different environments.

Indexed as

Signal TransductionBacterial ProteinsDNA, BacterialGene Expression ProfilingGene Expression Regulation, BacterialGenes, BacterialGene SilencingGenes, RegulatorOligonucleotide Array Sequence AnalysisPeptide Chain Initiation, TranslationalPseudomonas aeruginosaRNA, BacterialRNA StabilityRNA, UntranslatedTrans-ActivatorsTranscription FactorsBacterial ProteinsDNA, BacterialGacA protein, BacterialemA protein, bacterialMvaT protein, PseudomonasRNA, BacterialRNA, UntranslatedTrans-ActivatorsTranscription Factors

Identifiers

PMID19602144
PMCPMC2761719
OpenAlexW2115593351

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.