Evidence map›Paper›PMID 19596791›Full record

ArticleMolecular and cellular biology2009

Coupling phosphate homeostasis to cell cycle-specific transcription: mitotic activation of Saccharomyces cerevisiae PHO5 by Mcm1 and Forkhead proteins.

Santhi Pondugula, Daniel W Neef, Warren P Voth, Russell P Darst, Archana Dhasarathy, M Megan Reynolds, Shinya Takahata, David J Stillman, Michael P Kladde

Abstract read
In one paragraph

Article in Molecular and cellular biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 24 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Santhi PondugulaDepartment of Biochemistry and Molecular Biology and University of Florida Shands Cancer Center, University of Florida College of Medicine, Gainesville, FL 32610-3633, USA.
Daniel W Neef
Warren P Voth
Russell P Darst
Archana Dhasarathy
M Megan Reynolds
Shinya Takahata
David J Stillman
Michael P Kladde
University of Florida Health · USUniversity of Utah · US

Funding

MOLECULAR MECHANISMS IN TRANSCRIPTIONAL REGULATIONR01GM039067 · NIGMS · UNIVERSITY OF UTAH · PI STILLMAN, DAVID J · 1988 to 2013
$3.9M
PROMOTER SPECIFICITY OF TRANSCRIPTION FACTORSR01GM048624 · NIGMS · UNIVERSITY OF UTAH · PI STILLMAN, DAVID J · 1993 to 2010
$2.7M
Regulation of Gene Expression in ChromatinR01CA095525 · NCI · UNIVERSITY OF FLORIDA · PI KLADDE, MICHAEL P · 2003 to 2007
$1.3M
NCI NIH HHS CA95525NCI NIH HHS R01 CA095525NIGMS NIH HHS GM39067NIGMS NIH HHS GM48624NIGMS NIH HHS R01 GM039067NIGMS NIH HHS R01 GM048624
6 · The paper itself

Abstract

Cells devote considerable resources to nutrient homeostasis, involving nutrient surveillance, acquisition, and storage at physiologically relevant concentrations. Many Saccharomyces cerevisiae transcripts coding for proteins with nutrient uptake functions exhibit peak periodic accumulation during M phase, indicating that an important aspect of nutrient homeostasis involves transcriptional regulation. Inorganic phosphate is a central macronutrient that we have previously shown oscillates inversely with mitotic activation of PHO5. The mechanism of this periodic cell cycle expression remains unknown. To date, only two sequence-specific activators, Pho4 and Pho2, were known to induce PHO5 transcription. We provide here evidence that Mcm1, a MADS-box protein, is essential for PHO5 mitotic activation. In addition, we found that cells simultaneously lacking the forkhead proteins, Fkh1 and Fkh2, exhibited a 2.5-fold decrease in PHO5 expression. The Mcm1-Fkh2 complex, first shown to transactivate genes within the CLB2 cluster that drive G(2)/M progression, also associated directly at the PHO5 promoter in a cell cycle-dependent manner in chromatin immunoprecipitation assays. Sds3, a component specific to the Rpd3L histone deacetylase complex, was also recruited to PHO5 in G(1). These findings provide (i) further mechanistic insight into PHO5 mitotic activation, (ii) demonstrate that Mcm1-Fkh2 can function combinatorially with other activators to yield late M/G(1) induction, and (iii) couple the mitotic cell cycle progression machinery to cellular phosphate homeostasis.

Indexed as

HomeostasisMitosisTranscription, GeneticAcid PhosphataseAmino Acid SequenceBinding SitesCell Cycle ProteinsDNA-Binding ProteinsEnzyme ActivationForkhead Transcription FactorsG1 PhaseG2 PhaseGene DeletionMinichromosome Maintenance 1 ProteinModels, GeneticMolecular Sequence DataAcid PhosphataseCell Cycle ProteinsDNA-Binding ProteinsFkh1 protein, S cerevisiaeFkh2 protein, S cerevisiaeForkhead Transcription FactorsMCM1 protein, S cerevisiaeMinichromosome Maintenance 1 ProteinPHO4 protein, S cerevisiaePHO5 protein, S cerevisiaePhosphatesPolyphosphatesSaccharomyces cerevisiae ProteinsTranscription Factors

Identifiers

PMID19596791
PMCPMC2738290
OpenAlexW2161266071

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.