Evidence map›Paper›PMID 19593212›Full record

ArticleJournal of hypertension2009

Novel genetic variants contributing to left ventricular hypertrophy: the HyperGEN study.

Donna K Arnett, Richard B Devereux, Dabeeru C Rao, Na Li, Weihong Tang, Rachel Kraemer, Steven A Claas, Joanlise M Leon, Ulrich Broeckel

Open access · greenAbstract read
In one paragraph

Article in Journal of hypertension, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
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  4. Association BetweenFrontiers in cardiovascular medicine · 2021
    Article
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  6. Multiple Roles of sFRP2 in Cardiac Development and Cardiovascular Disease.International journal of biological sciences · 2020
    Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 7 institutions in 1 country.

Donna K ArnettDepartment of Epidemiology, School of Public Health, University of Alabama at Birmingham, 1665 University Boulevard, Birmingham, AL, USA. arnett@uab.edu
Richard B Devereux
Dabeeru C Rao
Na Li
Weihong Tang
Rachel Kraemer
Steven A Claas
Joanlise M Leon
Ulrich Broeckel
Medical College of Wisconsin · USUniversity of Alabama at Birmingham · USCancer Research And Biostatistics · USCornell University · USTwin Cities Orthopedics · USUniversity of Minnesota · USWashington University in St. Louis · US

Funding

HYPERGEN: GENETICS OF LEFT VENTRICULAR HYPERTROPHYR01HL055673 · NHLBI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI ARNETT, DONNA K · 1996 to 2016
$18.1M
The Family Blood Pressure Program (HyperGEN Network)U01HL054471 · NHLBI · UNIVERSITY OF UTAH · PI HUNT, STEVEN C. · 2000 to 2007
$7.4M
The Family Blood Pressure Program (Program Data Center)U01HL054473 · NHLBI · WASHINGTON UNIVERSITY · PI RAO, DABEERU C · 2000 to 2008
$5.8M
NHLBI FAMILY BLOOD PRESSURE PROGRAM-HYPERGEN-MPLS FCU01HL054496 · NHLBI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI PANKOW, JAMES S · 2000 to 2004
$3.2M
HYPERGEN - BIRMINGHAM FIELD CENTERU01HL054495 · NHLBI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI LEWIS, CORA E · 2000 to 2004
$923k
HYPERGEN CENTRAL BIOCHEMISTRY LABORATORYU01HL054472 · NHLBI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI ECKFELDT, JOHN H · 2000 to 2004
$879k
HYPERGEN-NCU01HL054509 · NHLBI · UNIVERSITY OF NORTH CAROLINA CHAPEL HILL · PI NORTH, KARI E · 2000 to 2004
$640k
GENETIC DETERMINANTS OF HIGH BLOOD PRESSUREU10HL054515 · NHLBI · UNIVERSITY OF UTAH · PI LALOUEL, JEAN-MARC · 1995 to 1999
–
HYPERGENU10HL054471 · NHLBI · UNIVERSITY OF UTAH · PI HUNT, STEVEN C. · 1995 to 1999
–
HYPERGENU10HL054472 · NHLBI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI ECKFELDT, JOHN H · 1995 to 1999
–
HYPERGEN- DATA COORDINATING CENTERU10HL054473 · NHLBI · WASHINGTON UNIVERSITY · PI RAO, DABEERU C · 1995 to 1999
–
HYPERGENU10HL054495 · NHLBI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI OBERMAN, ALBERT J · 1995 to 1999
–
NHLBI NIH HHS HL54471NHLBI NIH HHS HL54472NHLBI NIH HHS HL54473NHLBI NIH HHS HL54495NHLBI NIH HHS HL54496NHLBI NIH HHS HL54509NHLBI NIH HHS HL54515NHLBI NIH HHS R01 HL055673NHLBI NIH HHS R01 HL55673NHLBI NIH HHS U01 HL054471NHLBI NIH HHS U01 HL054472NHLBI NIH HHS U01 HL054473NHLBI NIH HHS U01 HL054495NHLBI NIH HHS U01 HL054496NHLBI NIH HHS U01 HL054509NHLBI NIH HHS U10 HL054471NHLBI NIH HHS U10 HL054472NHLBI NIH HHS U10 HL054473NHLBI NIH HHS U10 HL054495NHLBI NIH HHS U10 HL054496NHLBI NIH HHS U10 HL054509NHLBI NIH HHS U10 HL054515
6 · The paper itself

Abstract

objectivesTo identify genes contributing to variation in echocardiographic left ventricular mass and related traits using linkage and linkage disequilibrium analysis in sibships ascertained on hypertension.

methodsThe Hypertension Genetic Epidemiology Network (HyperGEN) Study of left ventricular hypertrophy characterized left ventricular mass, relative wall thickness (RWT), and aortic root diameter (ARD) with echocardiograms collected using a standardized protocol at four HyperGEN field centers. A high-throughput scanning fluorescence detector system genotyped 387 polymorphisms distributed throughout the genome. Linkage analyses were conducted once genotyping results became available for 885 siblings from 382 sibships.

resultsAlthough single logarithm of the odds (LOD) score peaks of 1.2 or more were found on chromosomes 1, 4, 5, 6, 7, 8, 9, 10, 12, 14, 17, and 21, we observed a broad band of peaks in both ethnic groups (white and black) on chromosome 4 and selected candidate genes (NPY1R, NPY2R, NPY5R, SFRP2, CPE, IL15, and EDNRA) from this region. Using cases and controls from extremes of the left ventricular mass index, RWT, and ARD distributions, we assessed associations with these phenotypes and haplotype-tagging single-nucleotide polymorphisms (SNPs) in the candidates. Among blacks, SNPs in IL15, NPY2R, and NPY5R showed strong evidence for association (P < 0.005); all candidates except EDNRA showed suggestive association (P < 0.05). In whites, NPY2R, NPY5R, and SFRP2 SNPs offered suggestive evidence of association with one or more traits (P < 0.05).

conclusionGenetic variation in NPY1R, NPY2R, NPY5R, CPE, IL15, and SFRP2, detected using linkage analysis in hypertensive siblings, was associated with left ventricular phenotypes in blacks and/or whites.

Indexed as

Genetic Predisposition to DiseaseAdultAgedComputational BiologyFemaleGenetic LinkageGenome-Wide Association StudyHumansHypertrophy, Left VentricularInterleukin-15MaleMembrane ProteinsMiddle AgedPolymorphism, Single NucleotideReceptors, Neuropeptide YSecreted Frizzled-Related ProteinsInterleukin-15Membrane Proteinsneuropeptide Y-Y1 receptorReceptors, Neuropeptide YSecreted Frizzled-Related ProteinsSFRP2 protein, human

Identifiers

PMID19593212
PMCPMC2868312
OpenAlexW2116786571

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.