Evidence map›Paper›PMID 19592585›Full record

ArticleJournal of bacteriology2009

The Mycobacterium tuberculosis sigma factor sigmaB is required for full response to cell envelope stress and hypoxia in vitro, but it is dispensable for in vivo growth.

P A Fontán, M I Voskuil, M Gomez, D Tan, M Pardini, R Manganelli, L Fattorini, G K Schoolnik, I Smith

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 80 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Oxidative damage and delayed replication allow viableScience translational medicine · 2021
    Article
  12. Article
  13. The mycobacterial cell envelope - a moving target.Nature reviews. Microbiology · 2020
    Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Deletion ofAntimicrobial agents and chemotherapy · 2017
    Article
  20. The Capacity ofmBio · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

P A FontánPHRI Center of NJMS-UMDNJ, 225 Warren Street, Newark, New Jersey 07103-3535, USA.
M I Voskuil
M Gomez
D Tan
M Pardini
R Manganelli
L Fattorini
G K Schoolnik
I Smith
Istituto Superiore di Sanità · ITRutgers, The State University of New Jersey · USStanford University · USUniversity of Padua · IT

Funding

M TUBERCULOSIS SURVIVAL AND GROWTH IN VIVOR01AI044856 · NIAID · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI RODRIGUEZ, GLORIA MARCELA, SMITH, ISSAR · 1999 to 2014
$6.8M
The Mycobacterium Tuberculosis Dormancy ProgramR01AI061505 · NIAID · UNIVERSITY OF COLORADO DENVER · PI VOSKUIL, MARTIN INUA · 2005 to 2015
$3.6M
MTB--MYCOLIC ACID BIOSYNTHETIC AND REGULATORY GENESR01AI044826 · NIAID · STANFORD UNIVERSITY · PI SCHOOLNIK, GARY K · 1999 to 2003
$1.3M
NIAID NIH HHS AI-061505NIAID NIH HHS R01 AI044826NIAID NIH HHS R01 AI044856NIAID NIH HHS R01 AI061505NIAID NIH HHS R01 AI44826NIAID NIH HHS R01 AI-44856PHS HHS N01-A/30036
6 · The paper itself

Abstract

The numerous sigma (sigma) factors present in Mycobacterium tuberculosis are indicative of the adaptability of this pathogen to different environmental conditions. In this report, we describe the M. tuberculosis sigma(B) regulon and the phenotypes of an M. tuberculosis sigB mutant strain exposed to cell envelope stress, oxidative stress, and hypoxia. The sigB mutant was especially defective in survival under hypoxic conditions in vitro, but it was not attenuated for growth in THP-1 cells or during mouse and guinea pig infection.

Indexed as

Gene Expression Regulation, BacterialHeat-Shock ResponseAnimalsBacterial ProteinsCells, CulturedCell WallGene Expression ProfilingGuinea PigsHumansHypoxiaMacrophagesMiceMice, Inbred BALB CMutationMycobacterium tuberculosisOligonucleotide Array Sequence AnalysisBacterial ProteinsSigB protein, BacteriaSigma Factor

Identifiers

PMID19592585
PMCPMC2737972
OpenAlexW1993086228

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.