Evidence map›Paper›PMID 19591883›Full record

ArticleMolecular and biochemical parasitology2009

Catalytic and ligand-binding characteristics of Plasmodium falciparum serine hydroxymethyltransferase.

Cullen K T Pang, Joshua H Hunter, Ramesh Gujjar, Ramulu Podutoori, Julie Bowman, Devaraja G Mudeppa, Pradipsinh K Rathod

Abstract read
In one paragraph

Article in Molecular and biochemical parasitology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 33 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Cullen K T PangDepartment of Chemistry, University of Washington, Seattle, WA 98195, USA.
Joshua H Hunter
Ramesh Gujjar
Ramulu Podutoori
Julie Bowman
Devaraja G Mudeppa
Pradipsinh K Rathod
University of Washington · US

Funding

Thymidylate synthase inhibitors for malariaP01AI060360 · NIAID · UNIVERSITY OF WASHINGTON · PI RATHOD, PRADIPSINH K. · 2004 to 2008
$4.0M
REGULATION OF MALARIAL DHFR-TSR01AI026912 · NIAID · UNIVERSITY OF WASHINGTON · PI RATHOD, PRADIPSINH K. · 1994 to 2005
$1.3M
ANTIMALARIAL ACTIVITY OF OROTIC ACID ANALOGSR29AI026912 · NIAID · CATHOLIC UNIVERSITY OF AMERICA · PI RATHOD, PRADIPSINH K. · 1989 to 1993
–
NIAID NIH HHS AI 26912NIAID NIH HHS AI 60360NIAID NIH HHS P01 AI060360NIAID NIH HHS R01 AI026912
6 · The paper itself

Abstract

The plant-like, bifunctional dihydrofolate reductase-thymidylate synthase (DHFR-TS) from malaria parasites has been a good target for drug development. Dihydrofolate reductase (DHFR) is inhibited by clinically established antimalarials, pyrimethamine and cycloguanil. Thymidylate synthase (TS) is the target of potent experimental antimalarials such as 5-fluoroorotate and 1843U89. Another enzyme in folate recycling, serine hydroxymethyltransferase (SHMT), produces 5,10-methylenetetrahydrofolate which, in many cells, is required for the de novo, biosynthesis of thymidine and methionine. Thus, the biochemical characterization of malarial SHMT was of interest. The principle, active Plasmodium falciparum SHMT (PfSHMT) was expressed in E. coli and purified using an N-terminal histidine tag. Unlike the plant enzyme, but like the host enzyme, PfSHMT requires the cofactor pyridoxal 5'-phosphate for enzymatic activity. The substrate specificities for serine, tetrahydrofolate, and pyridoxal 5'-phosphate were comparable to those for SHMT from other organisms. Antifolates developed for DHFR and TS inhibited SHMT in the mid-micromolar range, offering insights into the binding preferences of SHMT but clearly leaving room for improved new inhibitors. As previously seen with P. falciparum DHFR-TS, PfSHMT bound its cognate mRNA but not control RNA for actin. RNA binding was not reversed with enzyme substrates. Unlike DHFR-TS, the SHMT RNA-protein interaction was not tight enough to inhibit translation. Another gene PF14_0534, previously proposed to code for an alternate mitochondrial SHMT, was also expressed in E. coli but found to be inactive. This protein, nor DHFR-TS, enhanced the catalytic activity of PfSHMT. The present results set the stage for developing specific, potent inhibitors of SHMT from P. falciparum.

Indexed as

AnimalsChromatography, AffinityCloning, MolecularCoenzymesEnzyme InhibitorsEscherichia coliFolic Acid AntagonistsGene ExpressionGlycine HydroxymethyltransferasePlasmodium falciparumProtein BindingPyridoxal PhosphateRecombinant Fusion ProteinsRNA, MessengerSerineSubstrate Specificity5,6,7,8-tetrahydrofolic acidCoenzymesEnzyme InhibitorsFolic Acid AntagonistsGlycine HydroxymethyltransferasePyridoxal PhosphateRecombinant Fusion ProteinsRNA, MessengerSerineTetrahydrofolates

Identifiers

PMID19591883
PMCPMC2741015
OpenAlexW2080566623

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.