Evidence map›Paper›PMID 19590694›Full record

ArticleEnvironmental health perspectives2009

Perturbation of defense pathways by low-dose arsenic exposure in zebrafish embryos.

Carolyn J Mattingly, Thomas H Hampton, Kimberly M Brothers, Nina E Griffin, Antonio Planchart

Open access · diamondAbstract read
In one paragraph

Article in Environmental health perspectives, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
4.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 64 citations in OpenAlex.

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  9. Role ofBiochemistry and biophysics reports · 2015
    Article
  10. Zebrafish: A marvel of high-throughput biology for 21Current environmental health reports · 2014
    Article
  11. Arsenic immunotoxicity: a review.Environmental health : a global access science source · 2013
    Review
  12. Article
  13. Article
  14. Article
  15. Arsenic exposure to killifish during embryogenesis alters muscle development.Toxicological sciences : an official journal of the Society of Toxicology · 2012
    Article
  16. Article
  17. Aquatic models, genomics and chemical risk management.Comparative biochemistry and physiology. Toxicology & pharmacology : CBP · 2012
    Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Carolyn J MattinglyMount Desert Island Biological Laboratory, Salisbury Cove, Maine 04679, USA.
Thomas H Hampton
Kimberly M Brothers
Nina E Griffin
Antonio Planchart
Mount Desert Island Biological Laboratory · USDartmouth College · USUniversity of Maine · US

Funding

VARIATION IN BIOACCUMULATION AND BIOMAGNIFICATION OF METALS IN NORTHERN US LAKESP42ES007373 · NIEHS · DARTMOUTH COLLEGE · PI STANTON, BRUCE A. · 1995 to 2019
$52.0M
WNT SIGNALING IN THE DEVELOPING GASTROINTESTINAL TRACTP20RR016463 · NCRR · MOUNT DESERT ISLAND BIOLOGICAL LAB · PI WRAY, CHRISTOPHER C · 2001 to 2011
$41.0M
THE EPITHELIA OF THE EYE--EFFECT OF ENVIRONMENTAL AGENTSP30ES003828 · NIEHS · MOUNT DESERT ISLAND BIOLOGICAL LAB · PI HENSON, JOHN H · 1987 to 2008
$4.1M
NCRR NIH HHS P20 RR016463NCRR NIH HHS P20RR-016463NIEHS NIH HHS P30 ES003828NIEHS NIH HHS P30ES003828NIEHS NIH HHS P42 ES007373NIEHS NIH HHS P42ES007373
6 · The paper itself

Abstract

backgroundExposure to arsenic is a critical risk factor in the complex interplay among genetics, the environment, and human disease. Despite the potential for in utero exposure, the mechanism of arsenic action on vertebrate development and disease is unknown.

objectivesThe objective of this study was to identify genes and gene networks perturbed by arsenic during development in order to enhance understanding of the molecular mechanisms of arsenic action.

methodsWe exposed zebrafish embryos at 0.25-1.25 hr postfertilization to 10 or 100 ppb arsenic for 24 or 48 hr. We then used total RNA to interrogate genome microarrays and to test levels of gene expression changes by quantitative real-time polymerase chain reaction (QPCR). Computational analysis was used to identify gene expression networks perturbed by arsenic during vertebrate development.

resultsWe identified a set of 99 genes that responded to low levels of arsenic. Nineteen of these genes were predicted to function in a common regulatory network that was significantly associated with immune response and cancer (p < 10(-41)). Arsenic-mediated expression changes were validated by QPCR.

conclusionsIn this study we demonstrated that arsenic significantly down-regulates expression levels of multiple genes potentially critical for regulating the establishment of an immune response. The data also provide molecular evidence consistent with phenotypic observations reported in other model systems. Additional mechanistic studies will help explain molecular events regulating early stages of the immune system and long-term consequences of arsenic-mediated perturbation of this system during development.

Indexed as

AnimalsArsenicEmbryo, NonmammalianGene ExpressionOligonucleotide Array Sequence AnalysisReverse Transcriptase Polymerase Chain ReactionWater Pollutants, ChemicalZebrafishArsenicWater Pollutants, ChemicalarsenicComparative Toxicogenomics Databaseembryonic developmentgene regulatory networksimmunitymicroarraytoxicogenomicstranscriptional profilingzebrafish

Identifiers

PMID19590694
PMCPMC2702417
OpenAlexW1981713857

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.