Evidence map›Paper›PMID 19590009›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2009

Identification of the functional core of the influenza A virus A/M2 proton-selective ion channel.

Chunlong Ma, Alexei L Polishchuk, Yuki Ohigashi, Amanda L Stouffer, Arne Schön, Emma Magavern, Xianghong Jing, James D Lear, Ernesto Freire, Robert A Lamb and 2 more

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 113 papers.

0numbers the graph read from it
0cells of the map it votes in
113citing papers in PubMed
8.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

113 citing papers in PubMed, 170 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
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  5. Review
  6. Article
  7. Article
  8. The Role of Cholesterol in M2 Clustering and Viral Budding Explained.Journal of chemical theory and computation · 2025
    Article
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  14. Article
  15. Spiers Memorial Lecture: Analysis andFaraday discussions · 2021
    Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article

53 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Chunlong MaDepartments of Neurobiology and Physiology, Northwestern University, Evanston, IL 60208-3500, USA.
Alexei L Polishchuk
Yuki Ohigashi
Amanda L Stouffer
Arne Schön
Emma Magavern
Xianghong Jing
James D Lear
Ernesto Freire
Robert A Lamb
William F DeGrado
Lawrence H Pinto
University of Pennsylvania · USNorthwestern University · USJohns Hopkins University · USHoward Hughes Medical Institute · US

Funding

Understanding Envelope Function in HIV-1 Infection: The Design, Synthesis and Validation of Small Molecule HIV-1 Env InhibitorsP01GM056550 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI ABRAMS, CAMERON F · 1997 to 2018
$31.2M
STRUCTURAL BIOLOGY TRAINING PROGRAMT32GM008275 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI WAND, A. JOSHUA · 1988 to 2018
$6.0M
STRUCTURE BASED THERMODYNAMIC STUDIES OF HIV1 PROTEASER01GM057144 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI FREIRE, ERNESTO · 1998 to 2012
$5.8M
Structure of M2 Proton Channel from Influenza A VirusR01GM056423 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI DEGRADO, WILLIAM · 1997 to 2016
$4.5M
Design and mechanistic studies of mimics of antimicrobial peptidesR01AI074866 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI DEGRADO, WILLIAM · 2008 to 2012
$3.0M
The Structure and Function of the Influenza Virus GenomeR01AI020201 · NIAID · NORTHWESTERN UNIVERSITY · PI LAMB, ROBERT A · 1985 to 2016
$2.8M
STRUCTURE/FUNCTION OF THE INFLUENZA VIRUS GENOMER37AI020201 · NIAID · NORTHWESTERN UNIVERSITY · PI LAMB, ROBERT A · 1987 to 2006
$1.8M
Studies on Influenza B Virus BM2 Protein Ion ChannelR01AI057363 · NIAID · NORTHWESTERN UNIVERSITY · PI PINTO, LAWRENCE H · 2005 to 2009
$1.4M
Design and mechanistic studies of mimics of antimicrobial peptidesR56AI074866 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI DEGRADO, WILLIAM · 2013 to 2013
$573k
The Structure and Function of the Influenza Virus GenomeR56AI020201 · NIAID · NORTHWESTERN UNIVERSITY · PI LAMB, ROBERT A · 2011 to 2011
$369k
Howard Hughes Medical InstituteNIAID NIH HHS AI-20201NIAID NIH HHS AI-57363NIAID NIH HHS AI-74866NIAID NIH HHS R01 AI020201NIAID NIH HHS R01 AI057363NIAID NIH HHS R01 AI074866NIAID NIH HHS R37 AI020201NIAID NIH HHS R56 AI020201NIAID NIH HHS R56 AI074866NIGMS NIH HHS GM-56423NIGMS NIH HHS GM-56550NIGMS NIH HHS GM-57144NIGMS NIH HHS P01 GM056550NIGMS NIH HHS R01 GM056423NIGMS NIH HHS R01 GM057144NIGMS NIH HHS T32 GM008275
6 · The paper itself

Abstract

The influenza A virus M2 protein (A/M2) is a homotetrameric pH-activated proton transporter/channel that mediates acidification of the interior of endosomally encapsulated virus. This 97-residue protein has a single transmembrane (TM) helix, which associates to form homotetramers that bind the anti-influenza drug amantadine. However, the minimal fragment required for assembly and proton transport in cellular membranes has not been defined. Therefore, the conductance properties of truncation mutants expressed in Xenopus oocytes were examined. A short fragment spanning residues 21-61, M2(21-61), was inserted into the cytoplasmic membrane and had specific, amantadine-sensitive proton transport activity indistinguishable from that of full-length A/M2; an epitope-tagged version of an even shorter fragment, M2(21-51)-FLAG, had specific activity within a factor of 2 of the full-length protein. Furthermore, synthetic fragments including a peptide spanning residues 22-46 were found to transport protons into liposomes in an amantadine-sensitive manner. In addition, the functionally important His-37 residue pK(a) values are highly perturbed in the tetrameric form of the protein, a property conserved in the TM peptide and full-length A/M2 in both micelles and bilayers. These data demonstrate that the determinants for folding, drug binding, and proton translocation are packaged in a remarkably small peptide that can now be studied with confidence.

Indexed as

AmantadineAmino Acid SequenceAnimalsBiological TransportDopamine AgentsFemaleHeLa CellsHumansHydrogen-Ion ConcentrationIon ChannelsMembrane PotentialsMicroinjectionsMolecular Sequence DataPeptide FragmentsProtein MultimerizationProtonsAmantadineDopamine AgentsIon ChannelsM2 protein, Influenza A virusPeptide FragmentsProtonsViral Matrix ProteinsViroporin Proteins

Identifiers

PMID19590009
PMCPMC2718339
OpenAlexW1987413552

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.