ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2009
Fine mapping and candidate gene analysis of spd6, responsible for small panicle and dwarfness in wild rice (Oryza rufipogon Griff.).
Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.
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Who cites it
14 citing papers in PubMed.
- NAM-BSA: A Bulked Segregant Analysis Method Using a NAM Population.Plants (Basel, Switzerland) · 2026Article
- Prioritization of candidate genes regulating the dwarfness in rice by integration of whole-genome and transcriptome analyses.Functional & integrative genomics · 2025Article
- qGLF5 from Oryza rufipogon Griff. improves kernel shape, plant architecture, and yield in rice.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023Article
- A super pan-genomic landscape of rice.Cell research · 2022Article
- Development and use of chromosome segment substitution lines as a genetic resource for crop improvement.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019Review
- A novel Rice QTL qOPW11 Associated with Panicle Weight Affects Panicle and Plant Architecture.Rice (New York, N.Y.) · 2018Article
- Identification of a Novel QTL for Panicle Length From Wild Rice (Frontiers in plant science · 2018Article
- Combination of twelve alleles at six quantitative trait loci determines grain weight in rice.PloS one · 2017Article
- Development and characterization of chromosome segment substitution lines derived from Oryza rufipogon in the genetic background of O. sativa spp. indica cultivar 9311.BMC genomics · 2016Article
- Prioritization of candidate genes in QTL regions based on associations between traits and biological processes.BMC plant biology · 2014Article
- Characterization of epistatic interaction of QTLs LH8 and EH3 controlling heading date in rice.Scientific reports · 2014Article
- Article
- Precise mapping Fhb5, a major QTL conditioning resistance to Fusarium infection in bread wheat (Triticum aestivum L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2011Article
- Fine mapping and candidate gene analysis of ptgms2-1, the photoperiod-thermo-sensitive genic male sterile gene in rice (Oryza sativa L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2011Article
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5 authors.
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Abstract
Identification of genes in rice that affect production and quality is necessary for improving the critical global food source. CSSL58, a chromosome segment substitution line (CSSL) containing a chromosome segment of Oryza rufipogon in the genetic background of the indica cultivar Teqing showed significantly smaller panicles, fewer grains per panicle, smaller grains and dwarfness compared with the recurrent parent Teqing. Genetic analysis of the BC(4)F(1) and BC(4)F(2) generations, derived from a cross between CSSL58 and Teqing, showed that these traits are controlled by the recessive gene spd6, which mapped to the short arm of chromosome 6. Fine mapping and high-resolution linkage analysis using 24,120 BC(4)F(3) plants and markers flanking spd6 were carried out, and the gene was localized to a 22.4 kb region that contains four annotated genes according to the genome sequence of japonica Nipponbare. Phenotypic evaluation of the nearly isogenic line NIL(spd6) revealed that spd6 from wild rice has pleiotropic effects on panicle number per plant, grain size, grain weight, grain number per panicle and plant height, suggesting that this gene might play an important role in the domestication of rice. The discovery of spd6 may ultimately be useful for the design and breeding of crops with high grain yield and quality.
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