Evidence map›Paper›PMID 19587118›Full record

ArticleMolecular biology of the cell2009

Central role of the oxygen-dependent degradation domain of Drosophila HIFalpha/Sima in oxygen-dependent nuclear export.

Maximiliano Irisarri, Sofía Lavista-Llanos, Nuria M Romero, Lázaro Centanin, Andrés Dekanty, Pablo Wappner

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.6field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Longevity GWAS Using the Drosophila Genetic Reference Panel.The journals of gerontology. Series A, Biological sciences and medical sciences · 2015
    Article
  5. Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Maximiliano IrisarriInstituto Leloir and FCEyN, Universidad de Buenos Aires, Consejo Nacional de Investigaciones Científicas y Técnicas, 1405 Buenos Aires, Argentina.
Sofía Lavista-Llanos
Nuria M Romero
Lázaro Centanin
Andrés Dekanty
Pablo Wappner
Consejo Nacional de Investigaciones Científicas y Técnicas · AR

Funding

Howard Hughes Medical Institute
6 · The paper itself

Abstract

The Drosophila HIFalpha homologue, Sima, is localized mainly in the cytoplasm in normoxia and accumulates in the nucleus upon hypoxic exposure. We have characterized the mechanism governing Sima oxygen-dependent subcellular localization and found that Sima shuttles continuously between the nucleus and the cytoplasm. We have previously shown that nuclear import depends on an atypical bipartite nuclear localization signal mapping next to the C-terminus of the protein. We show here that nuclear export is mediated in part by a CRM1-dependent nuclear export signal localized in the oxygen-dependent degradation domain (ODDD). CRM1-dependent nuclear export requires both oxygen-dependent hydroxylation of a specific prolyl residue (Pro850) in the ODDD, and the activity of the von Hippel Lindau tumor suppressor factor. At high oxygen tension rapid nuclear export of Sima occurs, whereas in hypoxia, Sima nuclear export is largely inhibited. HIFalpha/Sima nucleo-cytoplasmic localization is the result of a dynamic equilibrium between nuclear import and nuclear export, and nuclear export is modulated by oxygen tension.

Indexed as

Active Transport, Cell NucleusAmino Acid SequenceAnimalsAnimals, Genetically ModifiedDNA-Binding ProteinsDrosophila melanogasterDrosophila ProteinsHypoxia-Inducible Factor 1, alpha SubunitMolecular Sequence DataNuclear Export SignalsOxygenProcollagen-Proline DioxygenaseRecombinant Fusion ProteinsTransgenesVon Hippel-Lindau Tumor Suppressor ProteinDNA-Binding ProteinsDrosophila ProteinsHypoxia-Inducible Factor 1, alpha SubunitNuclear Export SignalsOxygenProcollagen-Proline DioxygenaseRecombinant Fusion ProteinsSima protein, DrosophilaVon Hippel-Lindau Tumor Suppressor Protein

Identifiers

PMID19587118
PMCPMC2735486
OpenAlexW2158951696

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.