Evidence map›Paper›PMID 19584931›Full record

ArticlePloS one2009

Drosophila RISC component VIG and its homolog Vig2 impact heterochromatin formation.

Elena Gracheva, Monica Dus, Sarah C R Elgin

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.1field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 29 citations in OpenAlex.

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  12. dCas9-targeted locus-specific protein isolation method identifies histone gene regulators.Proceedings of the National Academy of Sciences of the United States of America · 2018
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  13. Article
  14. Birth of a new gene on the Y chromosome of Drosophila melanogaster.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Elena GrachevaDepartment of Biology, Washington University in St Louis, St Louis, Missouri, USA.
Monica Dus
Sarah C R Elgin
Washington University in St. Louis · USCold Spring Harbor Laboratory · US

Funding

RNAi-directed assembly of heterochromatin in DrosophilaR01GM073190 · NIGMS · WASHINGTON UNIVERSITY · PI ELGIN, SARAH C.R. · 2005 to 2008
$1.2M
NIGMS NIH HHS GM73190NIGMS NIH HHS R01 GM073190
6 · The paper itself

Abstract

Heterochromatin formation plays an important role in gene regulation and the maintenance of genome integrity. Here we present results from a study of the D. melanogaster gene vig, encoding an RNAi complex component and its homolog vig2 (CG11844) that support their involvement in heterochromatin formation and/or maintenance. Protein null mutations vig(EP812) and vig2(PL470) act as modifiers of Position Effect Variegation (PEV). VIG and Vig2 are present in polytene chromosomes and partially overlap with HP1. Quantitative immunoblots show depletion of HP1 and HP2 (large isoform) in isolated nuclei from the vig(EP812) mutant. The vig2(PL470) mutant strain demonstrates a decreased level of H3K9me2. Pull-down experiments using antibodies specific to HP1 recovered both VIG and Vig2. The association between HP1 and both VIG and Vig2 proteins depends on an RNA component. The above data and the developmental profiles of the two genes suggest that Vig2 may be involved in heterochromatin targeting and establishment early in development, while VIG may have a role in stabilizing HP1/HP2 chromatin binding during later stages.

Indexed as

AnimalsBase SequenceBlotting, WesternDNA PrimersDrosophila melanogasterDrosophila ProteinsGene Expression ProfilingGene Expression Regulation, DevelopmentalHeterochromatinImmunoprecipitationReverse Transcriptase Polymerase Chain ReactionRNA-Induced Silencing ComplexDNA PrimersDrosophila ProteinsHeterochromatinRNA-Induced Silencing Complex

Identifiers

PMID19584931
PMCPMC2703606
OpenAlexW2144334508

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.