Evidence map›Paper›PMID 19584898›Full record

ArticleEuropean journal of human genetics : EJHG2010

Specific epigenetic alterations of IGF2-H19 locus in spermatozoa from infertile men.

Céline Chalas Boissonnas, Hafida El Abdalaoui, Virginie Haelewyn, Patricia Fauque, Jean Michel Dupont, Ivo Gut, Daniel Vaiman, Pierre Jouannet, Jörg Tost, Hélène Jammes

Open access · bronzeAbstract read
In one paragraph

Article in European journal of human genetics : EJHG, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 86 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
86citing papers in PubMed, 2 pooled it
6.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

86 citing papers in PubMed, 2 syntheses or guidelines pooled it, 235 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
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  4. Article
  5. Article
  6. Review
  7. The Study ofInternational journal of fertility & sterility · 2025
    Article
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  11. Article
  12. Article
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  15. Towards a Multi-Omics of Male Infertility.The world journal of men's health · 2023
    Review
  16. Review
  17. Article
  18. Article
  19. Article
  20. Review

26 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 2 countries.

Céline Chalas BoissonnasBiology of Reproduction-CECOS, Cochin-Saint Vincent de Paul Hospital, AP-HP, Department of Genetics and Development, Cochin Institute, University Paris-Descartes, Paris, France.
Hafida El Abdalaoui
Virginie Haelewyn
Patricia Fauque
Jean Michel Dupont
Ivo Gut
Daniel Vaiman
Pierre Jouannet
Jörg Tost
Hélène Jammes
Genoscope · FRAssistance Publique – Hôpitaux de Paris · FRUniversité Paris Cité · FRDélégation Paris 5 · FRInserm · FRInstitut Cochin · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA methylation marks, a key modification of imprinting, are erased in primordial germ cells and sex specifically re-established during gametogenesis. Abnormal epigenetic programming has been proposed as a possible mechanism compromising male fertility. We analysed by pyrosequencing the DNA methylation status of 47 CpGs located in differentially methylated regions (DMRs), the DMR0 and DMR2 of the IGF2 gene and in the 3rd and 6th CTCF-binding sites of the H19 DMR in human sperm from men with normal semen and patients with teratozoospermia (T) and/or oligo-astheno-teratozoospermia (OAT). All normal semen samples presented the expected high global methylation level for all CpGs analysed. In the teratozoospermia group, 11 of 19 patients presented a loss of methylation at variable CpG positions either in the IGF2 DMR2 or in both the IGF2 DMR2 and the 6th CTCF of the H19 DMR. In the OAT group, 16 of 22 patients presented a severe loss of methylation of the 6th CTCF, closely correlated with sperm concentration. The methylation state of DMR0 and of the 3rd CTCF was never affected by the pathological status of sperm samples. This study demonstrates that epigenetic perturbations of the 6th CTCF site of the H19 DMR might be a relevant biomarker for quantitative defects of spermatogenesis in humans. Moreover, we defined a methylation threshold sustaining the classification of patients in two groups, unmethylated and methylated. Using this new classification of patients, the observed intrinsic imprinting defects of spermatozoa appear not to impair significantly the outcome of assisted reproductive technologies.

Indexed as

Epigenesis, GeneticAdultBinding SitesCohort StudiesCpG IslandsDNA MethylationGenetic LociHumansInfertility, MaleInsulin-Like Growth Factor IIMaleReproductive Techniques, AssistedSpermatozoaTreatment OutcomeInsulin-Like Growth Factor II

Identifiers

PMID19584898
PMCPMC2987171
OpenAlexW2050664489

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.