Evidence map›Paper›PMID 19584881›Full record

ArticleObesity (Silver Spring, Md.)2009

Admixture mapping of quantitative trait loci for BMI in African Americans: evidence for loci on chromosomes 3q, 5q, and 15q.

Analabha Basu, Hua Tang, Donna Arnett, C Charles Gu, Tom Mosley, Sharon Kardia, Amy Luke, Bamidele Tayo, Richard Cooper, Xiaofeng Zhu and 1 more

Open access · bronzeAbstract readMulticenter Study
In one paragraph

Article in Obesity (Silver Spring, Md.), 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed, 3 pooled it
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 3 syntheses or guidelines pooled it, 41 citations in OpenAlex.

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  16. The analysis of ethnic mixtures.Methods in molecular biology (Clifton, N.J.) · 2012
    Article
  17. Article
  18. Recent admixture in an Indian population of African ancestry.American journal of human genetics · 2011
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 9 institutions in 2 countries.

Analabha BasuInstitute for Human Genetics, Department of Epidemiology and Biostatistics, University of California, San Francisco, California, USA.
Hua Tang
Donna Arnett
C Charles Gu
Tom Mosley
Sharon Kardia
Amy Luke
Bamidele Tayo
Richard Cooper
Xiaofeng Zhu
Neil Risch
Loyola University Chicago · USKaiser Permanente · USStanford University · USUniversity of Alabama at Birmingham · USUniversity of California, San Francisco · USUniversity of Michigan · USUniversity of Mississippi Medical Center · USUniversity School · USWashington University in St. Louis · US

Funding

GENETICS OF HYPERTENSION IN BLACKSR01HL053353 · NHLBI · LOYOLA UNIVERSITY CHICAGO · PI COOPER, RICHARD STANLEY · 1995 to 2013
$8.3M
Statistical methods for analyzing high-throughput genotype dataR01HG003054 · NHGRI · LOYOLA UNIVERSITY CHICAGO · PI ZHU, XIAOFENG · 2005 to 2017
$3.6M
Fine Mapping of Hypertension Genes Detected by Admixture Mapping in the FBPPR01HL086718 · NHLBI · CASE WESTERN RESERVE UNIVERSITY · PI ZHU, XIAOFENG · 2007 to 2011
$3.3M
NHGRI NIH HHS R01 HG003054NHLBI NIH HHS R01 HL053353NHLBI NIH HHS R01 HL086718
6 · The paper itself

Abstract

Obesity is a heritable trait and a major risk factor for highly prevalent common diseases such as hypertension and type 2 diabetes. Previously we showed that BMI was positively correlated with African ancestry among the African Americans (AAs) in the US National Heart, Lung, and Blood Institute's Family Blood Pressure Program (FBPP). In a set of 1,344 unrelated AAs, using Individual Ancestry (IA) estimates at 284 marker locations across the genome, we now present a quantitative admixture mapping analysis of BMI. We used a set of unrelated individuals from Nigeria to represent the African ancestral population and the European American (EA) in the FBPP as the European ancestral population. The analysis was based on a common set of 284 microsatellite markers genotyped in all three groups. We considered the quantitative trait, BMI, as the response variable in a regression analysis with the marker location specific excess European ancestry as the explanatory variable. After suitably adjusting for different covariates such as sex, age, and network, we found strong evidence for a positive association with European ancestry at chromosome locations 3q29 and 5q14 and a negative association on chromosome 15q26. To our knowledge, this is the largest quantitative admixture mapping effort in terms of sample size and marker locus involvement for the trait. These results suggest that these regions may harbor genes influencing BMI in the AA population.

Indexed as

Body Mass IndexChromosomes, Human, Pair 15Chromosomes, Human, Pair 3Chromosomes, Human, Pair 5Quantitative Trait LociAdultBlack or African AmericanFemaleGenetic Predisposition to DiseaseHumansMaleMicrosatellite RepeatsMiddle AgedObesityPhenotypeRegression Analysis

Identifiers

PMID19584881
PMCPMC2929755
OpenAlexW2036999836

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.