Evidence map›Paper›PMID 19584866›Full record

ArticleNature medicine2009

A small molecule blocking oncogenic protein EWS-FLI1 interaction with RNA helicase A inhibits growth of Ewing's sarcoma.

Hayriye V Erkizan, Yali Kong, Melinda Merchant, Silke Schlottmann, Julie S Barber-Rotenberg, Linshan Yuan, Ogan D Abaan, Tsu-Hang Chou, Sivanesan Dakshanamurthy, Milton L Brown and 2 more

Open access · greenAbstract read
In one paragraph

Article in Nature medicine, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 259 papers.

0numbers the graph read from it
0cells of the map it votes in
259citing papers in PubMed
19.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

259 citing papers in PubMed, 441 citations in OpenAlex.

  1. Trial
  2. Open-Label, Multicenter, Phase I/II, First-in-Human Trial of TK216: A First-Generation EWS::FLI1 Fusion Protein Antagonist in Ewing Sarcoma.Journal of clinical oncology : official journal of the American Society of Clinical Oncology · 2024
    Trial
  3. Trial
  4. Article
  5. Targeted and molecular therapies in Ewing sarcoma: a comprehensive review of preclinical and clinical advances.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2026
    Review
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  7. Article
  8. A ligandable PNT domain establishes ERG as a directly targetable oncogenic driver in prostate cancer.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
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199 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Hayriye V ErkizanGeorgetown University, Lombardi Comprehensive Cancer Center, Department of Oncology, Washington, DC, USA.
Yali Kong
Melinda Merchant
Silke Schlottmann
Julie S Barber-Rotenberg
Linshan Yuan
Ogan D Abaan
Tsu-Hang Chou
Sivanesan Dakshanamurthy
Milton L Brown
Aykut Uren
Jeffrey A Toretsky
Georgetown University Medical Center · USGeorgetown University · USMemorial Sloan Kettering Cancer Center · US

Funding

Tissue Culture Shared ResourceP30CA051008 · NCI · GEORGETOWN UNIVERSITY · PI Louis M Weiner · 1990 to 2026
$71.5M
SOFT TISSUE SARCOMA PROGRAM PROJECTP01CA047179 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI SINGER, SAMUEL · 1989 to 2010
$17.3M
TRAINING GRANT IN TUMOR BIOLOGYT32CA009686 · NCI · GEORGETOWN UNIVERSITY · PI ANNA Tate RIEGEL, DAVID J ROBBINS · 1996 to 2026
$10.8M
Isolation and small molecule targeting of Ewing's Sarcoma stem cellsR01CA138212 · NCI · GEORGETOWN UNIVERSITY · PI TORETSKY, JEFFREY A · 2008 to 2012
$2.4M
Signaling Pathways that Determine Ewings Sarcoma OutcomeR01CA088004 · NCI · UNIVERSITY OF MARYLAND BALTIMORE · PI TORETSKY, JEFFREY A · 2001 to 2008
$1.7M
Novel Compounds to Inactivate Oncogenic Fusion ProteinsR01CA133662 · NCI · GEORGETOWN UNIVERSITY · PI TORETSKY, JEFFREY A · 2009 to 2013
$1.5M
NCI NIH HHS P01 CA047179NCI NIH HHS P01 CA47179NCI NIH HHS P30 CA051008NCI NIH HHS R01 CA088004NCI NIH HHS R01 CA133662NCI NIH HHS R01CA133662NCI NIH HHS R01 CA138212NCI NIH HHS R01CA138212NCI NIH HHS T32 CA009686Wellcome Trust
6 · The paper itself

Abstract

Many sarcomas and leukemias carry nonrandom chromosomal translocations encoding tumor-specific mutant fusion transcription factors that are essential to their molecular pathogenesis. Ewing's sarcoma family tumors (ESFTs) contain a characteristic t(11;22) translocation leading to expression of the oncogenic fusion protein EWS-FLI1. EWS-FLI1 is a disordered protein that precludes standard structure-based small-molecule inhibitor design. EWS-FLI1 binding to RNA helicase A (RHA) is important for its oncogenic function. We therefore used surface plasmon resonance screening to identify compounds that bind EWS-FLI1 and might block its interaction with RHA. YK-4-279, a derivative of the lead compound from the screen, blocks RHA binding to EWS-FLI1, induces apoptosis in ESFT cells and reduces the growth of ESFT orthotopic xenografts. These findings provide proof of principle that inhibiting the interaction of mutant cancer-specific transcription factors with the normal cellular binding partners required for their oncogenic activity provides a promising strategy for the development of uniquely effective, tumor-specific anticancer agents.

Indexed as

AnimalsAntineoplastic AgentsCaspase 3Cells, CulturedChlorocebus aethiopsCOS CellsDEAD-box RNA HelicasesHumansIndolesMiceNeoplasm ProteinsOncogene Proteins, FusionProto-Oncogene Protein c-fli-1RNA-Binding Protein EWSSarcoma, EwingSurface Plasmon ResonanceAntineoplastic AgentsCaspase 3DEAD-box RNA HelicasesDHX9 protein, humanEWS-FLI fusion proteinIndolesNeoplasm ProteinsOncogene Proteins, FusionProto-Oncogene Protein c-fli-1RNA-Binding Protein EWSTranscription FactorsYK 4-279

Identifiers

PMID19584866
PMCPMC2777681
OpenAlexW2007438323

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.