Evidence map›Paper›PMID 19584060›Full record

ArticleThe Journal of biological chemistry2009

Solution structure of human Pex5.Pex14.PTS1 protein complexes obtained by small angle X-ray scattering.

Kumiko Shiozawa, Petr V Konarev, Christian Neufeld, Matthias Wilmanns, Dmitri I Svergun

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Peroxisome protein import: a complex journey.Biochemical Society transactions · 2016
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. The exportomer: the peroxisomal receptor export machinery.Cellular and molecular life sciences : CMLS · 2013
    Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Kumiko ShiozawaEuropean Molecular Biology Laboratory-Hamburg Outstation, c/o DESY, Notkestrasse 85, 22603 Hamburg, Germany.
Petr V Konarev
Christian Neufeld
Matthias Wilmanns
Dmitri I Svergun
European Molecular Biology Laboratory · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Pex5p receptor recognizes newly synthesized peroxisomal matrix proteins which have a C-terminal peroxisomal targeting signal to the peroxisome. After docking to protein complexes on the membrane, these proteins are translocated across the membrane. The docking mechanism remains unclear, as no structural data on the multicomponent docking complex are available. As the interaction of the cargo-loaded Pex5p receptor and the peroxisomal membrane protein Pex14p is the essential primary docking step, we have investigated the solution structure of these complexes by small angle x-ray scattering and static light scattering. Titration studies yielded a 1:6 stoichiometry for the Pex5p.Pex14p complex, and low resolution structural models were reconstructed from the x-ray scattering data. The free full-length human Pex5p is monomeric in solution, with an elongated, partially unfolded N-terminal domain. The model of the complex reveals that the N terminus of Pex5p remains extended in the presence of cargo and Pex14p, the latter proteins being significantly intermingled with the Pex5p moiety. These results suggest that the extended structure of Pex5p may play a role in interactions with other substrates such as lipids and membrane proteins during the formation of functional multiprotein complexes.

Indexed as

Chromatography, GelCircular DichroismCrystallography, X-RayHumansLightMembrane ProteinsModels, MolecularModels, StatisticalMolecular ConformationPeroxisome-Targeting Signal 1 ReceptorProtein BindingProtein ConformationProtein Structure, TertiaryReceptors, Cytoplasmic and NuclearRepressor ProteinsScattering, RadiationMembrane ProteinsPeroxisome-Targeting Signal 1 ReceptorPEX14 protein, humanPEX5 protein, humanReceptors, Cytoplasmic and NuclearRepressor Proteins

Identifiers

PMID19584060
PMCPMC2757235
OpenAlexW2101218774

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.