Evidence map›Paper›PMID 19581640›Full record

ArticleThe Journal of biological chemistry2009

Role of dimerization in the catalytic properties of the Escherichia coli disulfide isomerase DsbC.

Silvia A Arredondo, Tiffany F Chen, Austen F Riggs, Hiram F Gilbert, George Georgiou

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Disulfide bond formation in prokaryotes.Nature microbiology · 2018
    Review
  2. Article
  3. Review
  4. Article
  5. Integrating protein homeostasis strategies in prokaryotes.Cold Spring Harbor perspectives in biology · 2011
    Review
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Silvia A ArredondoDepartment of Chemical Engineering, School of Biological Sciences, University of Texas, Austin, Texas 78712, USA.
Tiffany F Chen
Austen F Riggs
Hiram F Gilbert
George Georgiou

Funding

PROTEIN DISULFIDE BOND ISOMERIZATION IN E COLIR01GM055090 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI BECKWITH, JONATHAN · 1998 to 2009
$4.3M
NIGMS NIH HHS GM55090NIGMS NIH HHS R01 GM055090
6 · The paper itself

Abstract

The bacterial protein-disulfide isomerase DsbC is a homodimeric V-shaped enzyme that consists of a dimerization domain, two alpha-helical linkers, and two opposing thioredoxin fold catalytic domains. The functional significance of the two catalytic domains of DsbC is not well understood yet. We have engineered heterodimer-like DsbC derivatives covalently linked via (Gly(3)-Ser) flexible linkers. We either inactivated one of the catalytic sites (CGYC), or entirely removed one of the catalytic domains while maintaining the putative binding area intact. Variants having a single active catalytic site display significant levels of isomerase activity. Furthermore, mDsbC[H45D]-dim[D53H], a DsbC variant lacking an entire catalytic domain but with an intact dimerization domain, also showed isomerase activity, albeit at lower levels. In addition, the absence of the catalytic domain allowed this protein to catalyze in vivo oxidation. Our results reveal that two catalytic domains in DsbC are not essential for disulfide bond isomerization and that a determining feature in isomerization is the availability of a substrate binding domain.

Indexed as

Protein MultimerizationCatalysisEscherichia coliEscherichia coli ProteinsOxidation-ReductionProtein Disulfide-IsomerasesProtein Structure, QuaternaryProtein Structure, SecondaryProtein Structure, TertiarydsbC protein, E coliEscherichia coli ProteinsProtein Disulfide-Isomerases

Identifiers

PMID19581640
PMCPMC2781991

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.