Evidence map›Paper›PMID 19581583›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2009

Probing the role of the cation-pi interaction in the binding sites of GPCRs using unnatural amino acids.

Michael M Torrice, Kiowa S Bower, Henry A Lester, Dennis A Dougherty

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Dopamine DInternational journal of molecular sciences · 2021
    Article
  5. Review
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  7. Article
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  12. Review
  13. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Michael M TorriceDivision of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA 91125, USA.
Kiowa S Bower
Henry A Lester
Dennis A Dougherty

Funding

NICOTINIC SYNAPSES, BIOPHYSICAL STUDIESR01NS011756 · NINDS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI LESTER, HENRY A. · 1985 to 2009
$3.4M
GPCRs: Chemical-Scale Studies with Unnatural Amino AcidsR01GM081662 · NIGMS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI DOUGHERTY, DENNIS A · 2008 to 2011
$1.2M
NIGMS NIH HHS GM 081662NIGMS NIH HHS R01 GM081662NINDS NIH HHS NS011756NINDS NIH HHS R01 NS011756
6 · The paper itself

Abstract

We describe a general application of the nonsense suppression methodology for unnatural amino acid incorporation to probe drug-receptor interactions in functional G protein-coupled receptors (GPCRs), evaluating the binding sites of both the M2 muscarinic acetylcholine receptor and the D2 dopamine receptor. Receptors were expressed in Xenopus oocytes, and activation of a G protein-coupled, inward-rectifying K(+) channel (GIRK) provided, after optimization of conditions, a quantitative readout of receptor function. A number of aromatic amino acids thought to be near the agonist-binding site were evaluated. Incorporation of a series of fluorinated tryptophan derivatives at W6.48 of the D2 receptor establishes a cation-pi interaction between the agonist dopamine and W6.48, suggesting a reorientation of W6.48 on agonist binding, consistent with proposed "rotamer switch" models. Interestingly, no comparable cation-pi interaction was found at the aligning residue in the M2 receptor.

Indexed as

Amino AcidsAnimalsBinding SitesCationsCodon, NonsenseFluorineHumansIon Channel GatingModels, MolecularProtein Structure, SecondaryReceptor, Muscarinic M2Receptors, Dopamine D2Receptors, G-Protein-CoupledStatic ElectricityXenopusAmino AcidsCationsCodon, NonsenseFluorineReceptor, Muscarinic M2Receptors, Dopamine D2Receptors, G-Protein-Coupled

Identifiers

PMID19581583
PMCPMC2715518

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.