Evidence map›Paper›PMID 19581394›Full record

ArticleInfection and immunity2009

The RNA binding protein CsrA is a pleiotropic regulator of the locus of enterocyte effacement pathogenicity island of enteropathogenic Escherichia coli.

Shantanu Bhatt, Adrianne Nehrling Edwards, Hang Thi Thu Nguyen, Didier Merlin, Tony Romeo, Daniel Kalman

Open access · greenAbstract read
In one paragraph

Article in Infection and immunity, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 63 papers.

0numbers the graph read from it
0cells of the map it votes in
63citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

63 citing papers in PubMed, 88 citations in OpenAlex.

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  10. Small RNA Regulation of Virulence in PathogenicFrontiers in cellular and infection microbiology · 2020
    Review
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3 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Shantanu BhattDepartment of Pathology and Laboratory Medicine, Emory University, Atlanta, Georgia 30322, USA.
Adrianne Nehrling Edwards
Hang Thi Thu Nguyen
Didier Merlin
Tony Romeo
Daniel Kalman
Emory University · US

Funding

Mechanism of CsrA-mediated global regulationR01GM059969 · NIGMS · UNIVERSITY OF NORTH TEXAS HLTH SCI CTR · PI BABITZKE, PAUL L, ROMEO, TONY · 1999 to 2021
$7.6M
Bacterial factors modulating host immunityR01DK074731 · NIDDK · EMORY UNIVERSITY · PI KALMAN, DANIEL · 2008 to 2018
$2.4M
NIDDK NIH HHS R01 DK074731NIDDK NIH HHS R01DK074731-01NIGMS NIH HHS R01 GM059969NIGMS NIH HHS R01-GM059969PHS HHS R01-A1056067-01
6 · The paper itself

Abstract

The attaching and effacing (A/E) pathogen enteropathogenic Escherichia coli (EPEC) forms characteristic actin-filled membranous protrusions upon infection of host cells termed pedestals. Here we examine the role of the RNA binding protein CsrA in the expression of virulence genes and proteins that are necessary for pedestal formation. The csrA mutant was defective in forming actin pedestals on epithelial cells and in disrupting transepithelial resistance across polarized epithelial cells. Consistent with reduced pedestal formation, secretion of the translocators EspA, EspB, and EspD and the effector Tir was substantially reduced in the csrA mutant. Purified CsrA specifically bound to the sepL espADB mRNA leader, and the corresponding transcript levels were reduced in the csrA mutant. In contrast, Tir synthesis was unaffected in the csrA mutant. Reduced secretion of Tir appeared to be in part due to decreased synthesis of EscD, an inner membrane architectural protein of the type III secretion system (TTSS) and EscF, a protein that forms the protruding needle complex of the TTSS. These effects were not mediated through the locus of enterocyte effacement (LEE) transcriptional regulator GrlA or Ler. In contrast to the csrA mutant, multicopy expression of csrA repressed transcription from LEE1, grlRA, LEE2, LEE5, escD, and LEE4, an effect mediated by GrlA and Ler. Consistent with its role in other organisms, CsrA also regulated flagellar motility and glycogen levels. Our findings suggest that CsrA governs virulence factor expression in an A/E pathogen by regulating mRNAs encoding translocators, effectors, or transcription factors.

Indexed as

Genomic Islands3T3 CellsAnimalsBacterial AdhesionBinding SitesCell PolarityEnteropathogenic Escherichia coliEscherichia coli ProteinsGlycogenMiceOperonPhosphoproteinsReceptors, Cell SurfaceRepressor ProteinsRNA-Binding ProteinsTrans-ActivatorsCsrA protein, E coliEscherichia coli ProteinsGlycogenGrlA protein, E coliGrlR protein, E coliLEE protein, E coliPhosphoproteinsReceptors, Cell SurfaceRepressor ProteinsRNA-Binding ProteinsTir protein, E coliTrans-Activators

Identifiers

PMID19581394
PMCPMC2737987
OpenAlexW2111798689

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.