Evidence map›Paper›PMID 19580749›Full record

ArticleBiophysical journal2009

Divalent cations slow activation of EAG family K+ channels through direct binding to S4.

Xiaofei Zhang, Badry Bursulaya, Christian C Lee, Bihan Chen, Kendra Pivaroff, Timothy Jegla

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
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  3. Review
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  7. Article
  8. Ether-à-go-go KThe Journal of physiology · 2018
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Xiaofei ZhangDepartment of Cell Biology, Institute for Childhood and Neglected Diseases, The Scripps Research Institute, La Jolla, California 92037, USA.
Badry Bursulaya
Christian C Lee
Bihan Chen
Kendra Pivaroff
Timothy Jegla
Scripps Research Institute · USGenomics Institute of the Novartis Research Foundation · US

Funding

Development of HTS Assays for Sub-Threshold Potassium ChannelsR21NS057000 · NINDS · SCRIPPS RESEARCH INSTITUTE, THE · PI JEGLA, TIMOTHY J · 2006 to 2006
$232k
NINDS NIH HHS 1R21NS057000-01NINDS NIH HHS R21 NS057000
6 · The paper itself

Abstract

Voltage-gated K+ channels share a common voltage sensor domain (VSD) consisting of four transmembrane helices, including a highly mobile S4 helix that contains the major gating charges. Activation of ether-a-go-go (EAG) family K+ channels is sensitive to external divalent cations. We show here that divalent cations slow the activation rate of two EAG family channels (Kv12.1 and Kv10.2) by forming a bridge between a residue in the S4 helix and acidic residues in S2. Histidine 328 in the S4 of Kv12.1 favors binding of Zn2+ and Cd2+, whereas the homologous residue Serine 321 in Kv10.2 contributes to effects of Mg2+ and Ni2+. This novel finding provides structural constraints for the position of transmembrane VSD helices in closed, ion-bound EAG family channels. Homology models of Kv12.1 and Kv10.2 VSD structures based on a closed-state model of the Shaker family K+ channel Kv1.2 match these constraints. Our results suggest close conformational conservation between closed EAG and Shaker family channels, despite large differences in voltage sensitivity, activation rates, and activation thresholds.

Indexed as

Amino Acid SequenceAnimalsCadmiumCations, DivalentEther-A-Go-Go Potassium ChannelsKv1.2 Potassium ChannelMagnesiumMembrane PotentialsMiceModels, MolecularMolecular Sequence DataMutationNickelPatch-Clamp TechniquesProtein ConformationSequence Homology, Amino AcidCadmiumCations, DivalentEther-A-Go-Go Potassium ChannelsKv10.2 potassium channel, mouseKv12.1 potassium channel, mouseKv1.2 Potassium ChannelMagnesiumNickelZinc

Identifiers

PMID19580749
PMCPMC2711382
OpenAlexW2023045667

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.