ArticleMolecular biology reports2010
The mitochondrial genome of Euphausia superba (Prydz Bay) (Crustacea: Malacostraca: Euphausiacea) reveals a novel gene arrangement and potential molecular markers.
Article in Molecular biology reports, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.
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20 citing papers in PubMed, 36 citations in OpenAlex.
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- Echinococcus granulosus (sensu stricto) (G1, G3) and E. ortleppi (G5) in Pakistan: phylogeny, genetic diversity and population structural analysis based on mitochondrial DNA.Parasites & vectors · 2020Article
- The First Genome Survey of the Antarctic Krill (Marine drugs · 2020Article
- First Report on Molecular Characterization ofFrontiers in veterinary science · 2020Article
- The first mitochondrial genome ofMitochondrial DNA. Part B, Resources · 2019Article
- First molecular description, phylogeny and genetic variation of Taenia hydatigena from Nigerian sheep and goats based on three mitochondrial genes.Parasites & vectors · 2019Article
- Complete mitochondrial genome of Antarctic krillMitochondrial DNA. Part B, Resources · 2017Article
- The characteristics and expression profiles of the mitochondrial genome for the Mediterranean species of the Bemisia tabaci complex.BMC genomics · 2013Article
- The mitochondrial genomes of Euphausia pacifica and Thysanoessa raschii sequenced using 454 next-generation sequencing, with a phylogenetic analysis of their position in the Malacostracan family tree.Molecular biology reports · 2012Article
- The complete mitochondrial genome of Pseudochauhanea macrorchis (Monogenea: Chauhaneidae) revealed a highly repetitive region and a gene rearrangement hot spot in Polyopisthocotylea.Molecular biology reports · 2012Article
- Assessing population-level variation in the mitochondrial genome of Euphausia superba using 454 next-generation sequencing.Molecular biology reports · 2012Article
- Determination of the complete mitochondrial DNA sequence of Octopus minor.Molecular biology reports · 2012Article
- The complete mitochondrial genomes of three cestode species of Taenia infecting animals and humans.Molecular biology reports · 2011Article
- Article
- Complete mitochondrial genome of the Chinese spiny lobster Panulirus stimpsoni (Crustacea: Decapoda): genome characterization and phylogenetic considerations.Molecular biology reports · 2011Article
- Phylogeography, Genetic Diversity and Population Structure ofIranian journal of parasitologyArticle
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5 authors at 3 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Euphausiid krill are dominant organisms in the zooplankton population and play a central role in marine ecosystems. In this paper, we described the gene organization, gene rearrangement and codon usage in the mitochondrial genome of Euphausia superba Dana 1852 (sampling from Prydz Bay, PB). The mitochondrial genome of E. superba is more than 15,498 bp in length (partial non-coding region was not determined). Translocation of four tRNAs (trnL ( 1 ), trnL ( 2 ), trnW and trnI) and duplication of one tRNA (trnN) were founded in the mitochondrial genome of E. superba when comparing its genome with the pancrustacean ground pattern. To investigate the phylogenetic relationship within Malacostraca, phylogenetic trees based on currently available malacostracan mitochondrial genomes were built with the maximum likelihood and the Bayesian models. All analyses based on nucleotide and amino acid data strongly support the monophyly of Stomatopoda, Penaeidae, Caridea, and Brachyura, which is consistent with previous research. However, the taxonomic position of Euphausiacea within Malacostraca is unstable. From comparing the mitochondrial genome between E. superba (PB) and E. superba (sampling from Weddell Sea, WS), we found that nad2 gene contains maximal variation with 61 segregating sites, following by nad5 gene which has 12 segregating sites. Thus, nad2 and nad5 genes may be used as potential molecular markers to study the inherit diversity among different E. superba groups, which would be helpful to the exploitation and management of E. superba resources.
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