Evidence map›Paper›PMID 19578332›Full record

ArticleNature chemical biology2009

Zebrafish chemical screening reveals an inhibitor of Dusp6 that expands cardiac cell lineages.

Gabriela Molina, Andreas Vogt, Ahmet Bakan, Weixiang Dai, Pierre Queiroz de Oliveira, Wade Znosko, Thomas E Smithgall, Ivet Bahar, John S Lazo, Billy W Day and 1 more

Open access · greenAbstract read
In one paragraph

Article in Nature chemical biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 139 papers.

0numbers the graph read from it
0cells of the map it votes in
139citing papers in PubMed
9.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

139 citing papers in PubMed, 257 citations in OpenAlex.

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  19. Calcium-Dependent Regulation of Neuronal Excitability Is Rescued in Fragile X Syndrome by a Tat-Conjugated N-Terminal Fragment of FMRP.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2024
    Article
  20. Article

79 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Gabriela MolinaDepartment of Microbiology and Molecular Genetics, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Andreas Vogt
Ahmet Bakan
Weixiang Dai
Pierre Queiroz de Oliveira
Wade Znosko
Thomas E Smithgall
Ivet Bahar
John S Lazo
Billy W Day
Michael Tsang
University of Pittsburgh · US

Funding

TARGETING STRESS-ACTIVATED AKT-MTOR DRIVEN TRANSLATIONU19CA052995 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI POWIS, GARTH · 1996 to 2009
$11.6M
Pittsburgh Molecular Libraries Screening Center(RMI)U54MH074411 · NIMH · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI LAZO, JOHN S. · 2005 to 2008
$10.1M
TRADITIONAL AND FLUOROUS SYNTHESIS APPROACHES TO DICTYOSTATIN ANTICANCER AGENTSP01CA078039 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI LAZO, JOHN S. · 1998 to 2009
$9.9M
Utilizing Small Molecule Screens to Delineate Embryonic Signaling MechanismsR01HD053287 · NICHD · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI HUKRIEDE, NEIL A, TSANG, MICHAEL WAIKOK · 2007 to 2016
$3.1M
Bridging Sequence Patterns and Structural DynamicsR01LM007994 · NLM · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI BAHAR, IVET · 2004 to 2011
$3.0M
Delineating the Role of FGF Signaling and Vertebrate Heart DevelopmentR01HL088016 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI TSANG, MICHAEL WAIKOK · 2008 to 2012
$2.1M
Structural Dynamics of Biomolecular SystemsR01GM086238 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI BAHAR, IVET · 2009 to 2012
$1.3M
NOVEL COMPOUNDS FROM ISOLATION AND CHEMICAL MODIFICATIONSU01CA052995 · NCI · UNIVERSITY OF ARIZONA · PI ZALKOW, LEON H · 1990 to 1995
–
NCI NIH HHS CA52995NCI NIH HHS CA78039NCI NIH HHS P01 CA078039NCI NIH HHS U01 CA052995NCI NIH HHS U19 CA052995NHLBI NIH HHS R01 HL 088016NHLBI NIH HHS R01 HL088016NICHD NIH HHS HD053287NICHD NIH HHS R01 HD053287NIGMS NIH HHS R01 GM086238NIMH NIH HHS MH074411NIMH NIH HHS U54 MH074411NLM NIH HHS R01 LM007994
6 · The paper itself

Abstract

The dual-specificity phosphatase 6 (Dusp6) functions as a feedback regulator of fibroblast growth factor (FGF) signaling to limit the activity of extracellular signal-regulated kinases (ERKs) 1 and 2. We have identified a small-molecule inhibitor of Dusp6-(E)-2-benzylidene-3-(cyclohexylamino)-2,3-dihydro-1H-inden-1-one (BCI)-using a transgenic zebrafish chemical screen. BCI treatment blocked Dusp6 activity and enhanced FGF target gene expression in zebrafish embryos. Docking simulations predicted an allosteric binding site for BCI within the phosphatase domain. In vitro studies supported a model in which BCI inhibits Dusp6 catalytic activation by ERK2 substrate binding. We used BCI treatment at varying developmental stages to uncover a temporal role for Dusp6 in restricting cardiac progenitors and controlling heart organ size. This study highlights the power of in vivo zebrafish chemical screens to identify new compounds targeting Dusp6, a component of the FGF signaling pathway that has eluded traditional high-throughput in vitro screens.

Indexed as

Cell LineageHeartAllosteric SiteAnimalsAnimals, Genetically ModifiedCyclohexylaminesDual Specificity Phosphatase 6Enzyme InhibitorsFibroblast Growth FactorsGene Expression Regulation, DevelopmentalIndenesMitogen-Activated Protein Kinase 1Protein BindingSmall Molecule LibrariesSubstrate SpecificityZebrafish2-benzylidene-3-(cyclohexylamino)-2,3-dihydro-1H-inden-1-oneCyclohexylaminesDual Specificity Phosphatase 6Enzyme InhibitorsFibroblast Growth FactorsIndenesMitogen-Activated Protein Kinase 1Small Molecule Libraries

Identifiers

PMID19578332
PMCPMC2771339
OpenAlexW2104785885

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.