Evidence map›Paper›PMID 19577645›Full record

ArticleMatrix biology : journal of the International Society for Matrix Biology2009

Site controlled transgenic mice validating increased expression from human matrix metalloproteinase (MMP-1) promoter due to a naturally occurring SNP.

Charles I Coon, Steven Fiering, Justin Gaudet, Colby A Wyatt, Constance E Brinckerhoff

Abstract read
In one paragraph

Article in Matrix biology : journal of the International Society for Matrix Biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.6field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 12 citations in OpenAlex.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Charles I CoonDepartment of Medicine, Dartmouth Medical School, Dartmouth Hitchcock Medical Center, NH 03756 Lebanon.
Steven Fiering
Justin Gaudet
Colby A Wyatt
Constance E Brinckerhoff
Dartmouth–Hitchcock Medical Center · US

Funding

Translational Engineering in Cancer (TEC)P30CA023108 · NCI · DARTMOUTH COLLEGE · PI Steven D Leach · 1985 to 2026
$91.3M
VASCULAR LEUKOCYTES: BASIC IMMUNOBIOLOGY AND FUNCTIONAL PLASTICITYP20RR016437 · NCRR · DARTMOUTH COLLEGE · PI GREEN, WILLIAM R · 2001 to 2010
$24.3M
Invasive Behavior of Tumor Cells Producing Collagenase-1R01CA077267 · NCI · DARTMOUTH COLLEGE · PI BRINCKERHOFF, CONSTANCE E · 1999 to 2013
$2.6M
REGULATION OF COLLAGENASE GENE EXPRESSIONR37AR026599 · NIAMS · DARTMOUTH COLLEGE · PI BRINCKERHOFF, CONSTANCE E · 1999 to 2006
$1.9M
REGULATION OF METALLOPROTEINASE GENE EXPRESSIONR01AR026599 · NIAMS · DARTMOUTH COLLEGE · PI BRINCKERHOFF, CONSTANCE E · 1986 to 2011
$1.7M
SWITCHING STUDIES IN ENDOGENOUS MOUSE BETA GLOBIN REGIONR01DK054071 · NIDDK · DARTMOUTH COLLEGE · PI FIERING, STEVEN · 1997 to 2006
$1.6M
NCI NIH HHS P30 CA023108NCI NIH HHS R01 CA077267NCRR NIH HHS COBRE P20 RR 16437-06NCRR NIH HHS P20 RR016437NIAMS NIH HHS R01 AR026599NIAMS NIH HHS R37 AR026599NIDDK NIH HHS R01 DK054071
6 · The paper itself

Abstract

Matrix metalloproteinases (MMPs) comprise a family of more than 20 members, each with the ability to degrade components of the extracellular matrix. The interstitial collagenases have the unique capacity to degrade the stromal collagens, types I, II and III, the body's most abundant proteins. These collagenases include MMP-1, MMP-8, MMP-13 and MMP-14. MMP-1, with a very broad expression pattern, has major roles in mediating matrix destruction in many diseases. We have described a single nucleotide polymorphism (SNP) in the MMP-1 promoter that augments transcription. This SNP is the presence or absence of an extra guanine (G) at -1607 bp, which creates the sequence 5'-GGAA-3'(2G allele), and which is an ETS binding site. Compared to the 1G allele (5'-GAA-3'), the 2G SNP is associated with enhanced transcription of MMP-1 and increased enzymatic activity. Although murine systems are often used to model human diseases, mice have only distant homologues of human MMP-1. Therefore, we used a technique for the targeted insertion of a single copy of a gene at the HPRT locus to compare expression of the 1G and 2G alleles. We generated transgenic mice with -4372 bp of the human MMP-1 promoter containing either the 1G or 2G SNP in front of the lac Z (E.coli ss-galactosidase) gene. We measured the relative expression of the transgenes in vitro in embryonic stem (ES) cells and in fibroblasts derived from embryonic mice. Our data show modest constitutive expression of ss-galactosidase mRNA and protein from these alleles, with the 2G allele more transcriptionally active than the 1G allele. We conclude that these mice represent a model for integration of a single copy of the human MMP-1 promoter into the murine genome, and could be used to study MMP-1 gene expression in a murine system.

Indexed as

Gene Expression Regulation, EnzymologicMatrix Metalloproteinase 1Mice, TransgenicPolymorphism, Single NucleotidePromoter Regions, GeneticAnimalsCells, CulturedCytokinesFibroblastsHumansIntercellular Signaling Peptides and ProteinsInterleukin-1betaMatrix Metalloproteinase 13MiceNIH 3T3 CellsCytokinesIntercellular Signaling Peptides and ProteinsInterleukin-1betaMatrix Metalloproteinase 1Matrix Metalloproteinase 13

Identifiers

PMID19577645
PMCPMC2783711
OpenAlexW2000556902

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.