Evidence map›Paper›PMID 19574954›Full record

ArticleThe EMBO journal2009

Insights into complement convertase formation based on the structure of the factor B-cobra venom factor complex.

Bert J C Janssen, Lucio Gomes, Roman I Koning, Dmitri I Svergun, Abraham J Koster, David C Fritzinger, Carl-Wilhelm Vogel, Piet Gros

Open access · greenAbstract read
In one paragraph

Article in The EMBO journal, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 71 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Immunity and Coagulation in COVID-19.International journal of molecular sciences · 2024
    Review
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  9. Combination of a Novel Genetic Variant inFrontiers in genetics · 2021
    Article
  10. Review
  11. Review
  12. Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Structural basis for therapeutic inhibition of complement C5.Nature structural & molecular biology · 2016
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 3 countries.

Bert J C JanssenCrystal and Structural Chemistry, Bijvoet Center for Biomolecular Research, Department of Chemistry, Faculty of Science, Utrecht University, Utrecht, The Netherlands.
Lucio Gomes
Roman I Koning
Dmitri I Svergun
Abraham J Koster
David C Fritzinger
Carl-Wilhelm Vogel
Piet Gros
Leiden University Medical Center · NLCancer Research Center · USEuropean Molecular Biology Laboratory · DEUniversity of Hawaiʻi at Mānoa · USUtrecht University · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Immune protection by the complement system critically depends on assembly of C3 convertases on the surface of pathogens and altered host cells. These short-lived protease complexes are formed through pro-convertases, which for the alternative pathway consist of the complement component C3b and the pro-enzyme factor B (FB). Here, we present the crystal structure at 2.2-A resolution, small-angle X-ray scattering and electron microscopy (EM) data of the pro-convertase formed by human FB and cobra venom factor (CVF), a potent homologue of C3b that generates more stable convertases. FB is loaded onto CVF through its pro-peptide Ba segment by specific contacts, which explain the specificity for the homologous C3b over the native C3 and inactive products iC3b and C3c. The protease segment Bb binds the carboxy terminus of CVF through the metal-ion dependent adhesion site of the Von Willebrand factor A-type domain. A possible dynamic equilibrium between a 'loading' and 'activation' state of the pro-convertase may explain the observed difference between the crystal structure of CVFB and the EM structure of C3bB. These insights into formation of convertases provide a basis for further development of complement therapeutics.

Indexed as

AnimalsCell LineComplement C3-C5 ConvertasesComplement Factor BCrystallography, X-RayElapidaeElapid VenomsEnzyme ActivationGene ExpressionHumansModels, MolecularMutationProtein BindingProtein ConformationProtein Structure, Tertiarycobra venom factorComplement C3-C5 ConvertasesComplement Factor BElapid Venoms

Identifiers

PMID19574954
PMCPMC2735180
OpenAlexW2117807431

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.