Evidence map›Paper›PMID 19574260›Full record

ArticleJournal of medical genetics2010

Mutations in 3 genes (MKS3, CC2D2A and RPGRIP1L) cause COACH syndrome (Joubert syndrome with congenital hepatic fibrosis).

D Doherty, M A Parisi, L S Finn, M Gunay-Aygun, M Al-Mateen, D Bates, C Clericuzio, H Demir, M Dorschner, A J van Essen and 13 more

Open access · greenAbstract readCase Reports
In one paragraph

Article in Journal of medical genetics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 82 papers.

0numbers the graph read from it
0cells of the map it votes in
82citing papers in PubMed
5.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

82 citing papers in PubMed, 151 citations in OpenAlex.

  1. Trial
  2. Review
  3. Review
  4. Article
  5. [A case of congenital hepatic fibrosis accompanied with multiple system abnormalities].Zhonghua gan zang bing za zhi = Zhonghua ganzangbing zazhi = Chinese journal of hepatology · 2025
    Article
  6. Article
  7. Strabismus in Genetic Syndromes: A Review.Clinical & experimental ophthalmology · 2025
    Review
  8. Article
  9. Article
  10. Nephronophthisis: a pathological and genetic perspective.Pediatric nephrology (Berlin, Germany) · 2024
    Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. The Joubert-Meckel-Nephronophthisis Spectrum of Ciliopathies.Annual review of genomics and human genetics · 2022
    Review
  16. Review
  17. Article
  18. Genotype-phenotype correlates in Joubert syndrome: A review.American journal of medical genetics. Part C, Seminars in medical genetics · 2022
    Review
  19. Article
  20. Article

22 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 12 institutions in 6 countries.

D DohertyUniversity of Washington, Seattle, WA 98195-0320, USA. ddoher@u.washington.edu
M A Parisi
L S Finn
M Gunay-Aygun
M Al-Mateen
D Bates
C Clericuzio
H Demir
M Dorschner
A J van Essen
W A Gahl
M Gentile
N T Gorden
A Hikida
D Knutzen
H Ozyurek
I Phelps
P Rosenthal
A Verloes
H Weigand
P F Chance
W B Dobyns
I A Glass
University of Washington · USNational Institutes of Health · USGastroenterology Hospital "Saverio de Bellis" · ITHacettepe University · TRHôpital Robert-Debré · FRLudwig-Maximilians-Universität München · DEMary Bridge Children's Health Center · USOndokuz Mayıs University · TRUniversity of California, San Francisco · USUniversity of Chicago · USUniversity of Groningen · NLUniversity of New Mexico · US

Funding

Human Biochemical GeneticsZIAHG000215 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI GAHL, WILLIAM · 2009 to 2025
$72.6M
Institute of Translational Health SciencesUL1TR000423 · NCATS · UNIVERSITY OF WASHINGTON · PI DISIS, MARY L. · 2012 to 2016
$49.4M
The Genetic Basis of Mid-Hindbrain MalformationsR01NS050375 · NINDS · UNIVERSITY OF MINNESOTA · PI DOBYNS, WILLIAM B. · 2005 to 2019
$9.9M
Institute for Translational Health Science (KL2)KL2RR025015 · NCRR · UNIVERSITY OF WASHINGTON · PI DISIS, MARY L. · 2007 to 2011
$9.3M
Joubert syndrome and related disorders of hindbrain developmentR01NS064077 · NINDS · UNIVERSITY OF WASHINGTON · PI DOHERTY, DANIEL · 2010 to 2014
$1.8M
Molecular basis of Joubert syndrome and related diseasesK23NS045832 · NINDS · UNIVERSITY OF WASHINGTON · PI PARISI, MELISSA ANN · 2003 to 2007
$831k
Genetic analyses of cerebellar malformationsK24HD046712 · NICHD · UNIVERSITY OF WASHINGTON · PI GLASS, IAN AMOS · 2005 to 2009
$492k
Intramural NIH HHS Z99 HG999999Intramural NIH HHS Z99 HL999999Intramural NIH HHS Z99 MH999999NCATS NIH HHS UL1 TR000423NCRR NIH HHS 5KL2RR025015NCRR NIH HHS KL2 RR025015NICHD NIH HHS K24 HD046712NICHD NIH HHS K24HD46712NINDS NIH HHS K23 NS045832NINDS NIH HHS K23NS45832NINDS NIH HHS R01 NS050375NINDS NIH HHS R01NS050375NINDS NIH HHS R01 NS064077
6 · The paper itself

Abstract

objectiveTo identify genetic causes of COACH syndrome

backgroundCOACH syndrome is a rare autosomal recessive disorder characterised by Cerebellar vermis hypoplasia, Oligophrenia (developmental delay/mental retardation), Ataxia, Coloboma, and Hepatic fibrosis. The vermis hypoplasia falls in a spectrum of mid-hindbrain malformation called the molar tooth sign (MTS), making COACH a Joubert syndrome related disorder (JSRD).

methodsIn a cohort of 251 families with JSRD, 26 subjects in 23 families met criteria for COACH syndrome, defined as JSRD plus clinically apparent liver disease. Diagnostic criteria for JSRD were clinical findings (intellectual impairment, hypotonia, ataxia) plus supportive brain imaging findings (MTS or cerebellar vermis hypoplasia). MKS3/TMEM67 was sequenced in all subjects for whom DNA was available. In COACH subjects without MKS3 mutations, CC2D2A, RPGRIP1L and CEP290 were also sequenced.

results19/23 families (83%) with COACH syndrome carried MKS3 mutations, compared to 2/209 (1%) with JSRD but no liver disease. Two other families with COACH carried CC2D2A mutations, one family carried RPGRIP1L mutations, and one lacked mutations in MKS3, CC2D2A, RPGRIP1L and CEP290. Liver biopsies from three subjects, each with mutations in one of the three genes, revealed changes within the congenital hepatic fibrosis/ductal plate malformation spectrum. In JSRD with and without liver disease, MKS3 mutations account for 21/232 families (9%).

conclusionsMutations in MKS3 are responsible for the majority of COACH syndrome, with minor contributions from CC2D2A and RPGRIP1L; therefore, MKS3 should be the first gene tested in patients with JSRD plus liver disease and/or coloboma, followed by CC2D2A and RPGRIP1L.

Indexed as

Adaptor Proteins, Signal TransducingAdolescentAtaxiaCerebellumColobomaCytoskeletal ProteinsFemaleHumansInfantIntellectual DisabilityLiver CirrhosisMaleMembrane ProteinsMutationProteinsSyndromeAdaptor Proteins, Signal TransducingCC2D2A protein, humanCytoskeletal ProteinsMembrane ProteinsProteinsRPGRIP1L protein, humanTMEM67 protein, human

Identifiers

PMID19574260
PMCPMC3501959
OpenAlexW2098559443

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.