Evidence map›Paper›PMID 19571304›Full record

ArticlePlant physiology2009

BOBBER1 is a noncanonical Arabidopsis small heat shock protein required for both development and thermotolerance.

Dahlia E Perez, J Steen Hoyer, Ayanna I Johnson, Zachary R Moody, Joseph Lopez, Nicholas J Kaplinsky

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed, 1 pooled it
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 1 synthesis or guideline pooled it, 98 citations in OpenAlex.

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  13. microPublication biology · 2022
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  17. Proteome-Wide Analysis of Heat-Stress inFrontiers in plant science · 2021
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Dahlia E PerezDepartment of Biology, Swarthmore College, Swarthmore, Pennsylvania 19081, USA.
J Steen Hoyer
Ayanna I Johnson
Zachary R Moody
Joseph Lopez
Nicholas J Kaplinsky
Swarthmore College · USStanford University · US

Funding

Pattern formation during Arabidopsis embryogenesisF32GM070137 · NIGMS · CARNEGIE INSTITUTION OF WASHINGTON, D.C. · PI KAPLINSKY, NICHOLAS J · 2004 to 2005
$77k
NIGMS NIH HHS F32 GM070137
6 · The paper itself

Abstract

Plants have evolved a range of cellular responses to maintain developmental homeostasis and to survive over a range of temperatures. Here, we describe the in vivo and in vitro functions of BOBBER1 (BOB1), a NudC domain containing Arabidopsis (Arabidopsis thaliana) small heat shock protein. BOB1 is an essential gene required for the normal partitioning and patterning of the apical domain of the Arabidopsis embryo. Because BOB1 loss-of-function mutants are embryo lethal, we used a partial loss-of-function allele (bob1-3) to demonstrate that BOB1 is required for organismal thermotolerance and postembryonic development. Recombinant BOB1 protein functions as a molecular chaperone and prevents the aggregation of a model protein substrate in vitro. In plants, BOB1 is cytoplasmic at basal temperatures, but forms heat shock granules containing canonical small heat shock proteins at high temperatures. In addition to thermotolerance defects, bob1-3 exhibits pleiotropic development defects during all phases of development. bob1-3 phenotypes include decreased rates of shoot and root growth as well as patterning defects in leaves, flowers, and inflorescence meristems. Most eukaryotic chaperones play important roles in protein folding either during protein synthesis or during cellular responses to denaturing stress. Our results provide, to our knowledge, the first evidence of a plant small heat shock protein that has both developmental and thermotolerance functions and may play a role in both of these folding networks.

Indexed as

Amino Acid SequenceArabidopsisArabidopsis ProteinsFlowersGene Expression Regulation, PlantHeat-Shock ProteinsHot TemperatureMeristemMolecular Sequence DataMutationProtein DenaturationArabidopsis ProteinsBOBBER1 protein, ArabidopsisHeat-Shock Proteins

Identifiers

PMID19571304
PMCPMC2735987
OpenAlexW2160586768

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.