Evidence map›Paper›PMID 19571123›Full record

ArticleThe Journal of neuroscience : the official journal of the Society for Neuroscience2009

Location of the beta 4 transmembrane helices in the BK potassium channel.

Roland S Wu, Neelesh Chudasama, Sergey I Zakharov, Darshan Doshi, Howard Motoike, Guoxia Liu, Yongneng Yao, Xiaowei Niu, Shi-Xian Deng, Donald W Landry and 2 more

Abstract read
In one paragraph

Article in The Journal of neuroscience : the official journal of the Society for Neuroscience, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed.

  1. Article
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  5. Article
  6. Article
  7. Review
  8. Article
  9. Molecular mechanism underlying β1 regulation in voltage- and calcium-activated potassium (BK) channels.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. Article
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  16. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Roland S WuDivision of Cardiology, Department of Medicine, College of Physicians and Surgeons, Columbia University, New York, New York 10032, USA.
Neelesh Chudasama
Sergey I Zakharov
Darshan Doshi
Howard Motoike
Guoxia Liu
Yongneng Yao
Xiaowei Niu
Shi-Xian Deng
Donald W Landry
Arthur Karlin
Steven O Marx

Funding

POSTDOCTORAL TRAINING IN CARDIOVASCULAR DISEASET32HL007854 · NHLBI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Marwah Abdalla, Michael Argenziano · 1996 to 2026
$14.7M
REGULATION OF RYANODINE RECEPTORS BY ALLOSTERIC MODULATIONP01HL081172 · NHLBI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI KARLIN, ARTHUR · 2007 to 2011
$7.3M
BK CHANNEL MODULATION BY BETA SUBUNITSR01NS054946 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI KARLIN, ARTHUR, MARX, STEVEN O · 2007 to 2014
$2.8M
Ion channel regulation by macromolecular complexesR01HL068093 · NHLBI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI MARX, STEVEN O · 2001 to 2010
$2.4M
NHLBI NIH HHS P01 HL081172NHLBI NIH HHS R01 HL068093NHLBI NIH HHS R01 HL68093NHLBI NIH HHS T32 HL007854NHLBI NIH HHS T32 HL07854NINDS NIH HHS R01 NS054946
6 · The paper itself

Abstract

Large-conductance, voltage- and Ca(2+)-gated potassium (BK) channels control excitability in a number of cell types. BK channels are composed of alpha subunits, which contain the voltage-sensor domains and the Ca(2+)- sensor domains and form the pore, and often one of four types of beta subunits, which modulate the channel in a cell-specific manner. beta 4 is expressed in neurons throughout the brain. Deletion of beta 4 in mice causes temporal lobe epilepsy. Compared with channels composed of alpha alone, channels composed of alpha and beta 4 activate and deactivate more slowly. We inferred the locations of the two beta 4 transmembrane (TM) helices TM1 and TM2 relative to the seven alpha TM helices, S0-S6, from the extent of disulfide bond formation between cysteines substituted in the extracellular flanks of these TM helices. We found that beta 4 TM2 is close to alpha S0 and that beta 4 TM1 is close to both alpha S1 and S2. At least at their extracellular ends, TM1 and TM2 are not close to S3-S6. In six of eight of the most highly crosslinked cysteine pairs, four crosslinks from TM2 to S0 and one each from TM1 to S1 and S2 had small effects on the V(50) and on the rates of activation and deactivation. That disulfide crosslinking caused only small functional perturbations is consistent with the proximity of the extracellular ends of TM2 to S0 and of TM1 to S1 and to S2, in both the open and closed states.

Indexed as

Models, MolecularProtein Structure, TertiaryAmino Acid SequenceAnimalsBiotinylationCell Line, TransformedCysteineHumansLarge-Conductance Calcium-Activated Potassium ChannelsMembrane PotentialsMiceMolecular Sequence DataMutagenesis, Site-DirectedPatch-Clamp TechniquesProtein Interaction Domains and MotifsStructure-Activity RelationshipCysteineLarge-Conductance Calcium-Activated Potassium Channels

Identifiers

PMID19571123
PMCPMC2737688

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.