Evidence map›Paper›PMID 19570978›Full record

ArticleThe Journal of biological chemistry2009

ABC50 promotes translation initiation in mammalian cells.

Sonia Paytubi, Xuemin Wang, Yun W Lam, Luis Izquierdo, Mairi J Hunter, Eric Jan, Harinder S Hundal, Christopher G Proud

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 117 citations in OpenAlex.

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  12. Delineating the Role ofPathogens (Basel, Switzerland) · 2021
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  17. Substrate recognition and ATPase activity of theThe Journal of biological chemistry · 2020
    Article
  18. Article
  19. ABCF1 Regulates dsDNA-induced Immune Responses in Human Airway Epithelial Cells.Frontiers in cellular and infection microbiology · 2020
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

Sonia PaytubiDivision of Molecular Physiology, School of Life Sciences, University of Dundee, Dundee DD1 5EH, Scotland, United Kingdom.
Xuemin Wang
Yun W Lam
Luis Izquierdo
Mairi J Hunter
Eric Jan
Harinder S Hundal
Christopher G Proud
University of British Columbia · CAUniversity of Dundee · GBExpression Génétique Microbienne · FRUniversity of Southampton · GB

Funding

Biotechnology and Biological Sciences Research Council C19142
6 · The paper itself

Abstract

ABC50 is an ATP-binding cassette (ABC) protein, which, unlike most ABC proteins, does not possess membrane-spanning domains. ABC50 interacts with eukaryotic initiation factor 2 (eIF2), which plays a key role in translation initiation and its control. ABC50 binds to ribosomes, and this interaction requires both the N-terminal domain and at least one ABC domain. Knockdown of ABC50 by RNA interference impaired translation of both cap-dependent and -independent reporters, consistent with a positive role for ABC50 in the function of eIF2, which is required for both types of translation initiation. Mutation of the Walker box A or B motifs in both ABC regions of ABC50 yielded a mutant protein that exerted a dominant-interfering phenotype with respect to protein synthesis and translation initiation. Importantly, although dominant-interfering mutants of ABC50 impaired cap-dependent translation, translation driven by certain internal ribosome entry segments was not inhibited. ABC50 is located in the cytoplasm and nucleoplasm but not in the nucleolus. Thus, ABC50 is not likely to be directly involved in early ribosomal biogenesis, unlike some other ABC proteins. Taken together, the present data show that ABC50 plays a key role in translation initiation and has functions that are distinct from those of other non-membrane ABC proteins.

Indexed as

Amino Acid MotifsATP-Binding Cassette TransportersCell LineEukaryotic Initiation Factor-2HumansMutationPeptide Chain Initiation, TranslationalProtein Structure, TertiaryRibosomesRNA CapsRNA InterferenceABCF1 protein, humanATP-Binding Cassette TransportersEukaryotic Initiation Factor-2RNA Caps

Identifiers

PMID19570978
PMCPMC2782000
OpenAlexW2093078995

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.