Evidence map›Paper›PMID 19570977›Full record

ArticleThe Journal of biological chemistry2009

Inhibition of nonsense-mediated mRNA decay by the natural product pateamine A through eukaryotic initiation factor 4AIII.

Yongjun Dang, Woon-Kai Low, Jing Xu, Niels H Gehring, Harry C Dietz, Daniel Romo, Jun O Liu

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 71 citations in OpenAlex.

  1. The cellular landscape of druggable RNA-binding proteins.Nature reviews. Drug discovery · 2026
    Review
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  5. Use of 2,6-diaminopurine as a potent suppressor of UGA premature stop codons in cystic fibrosis.Molecular therapy : the journal of the American Society of Gene Therapy · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Yongjun DangDepartment of Pharmacology, Howard Hughes Medical Institute, Johns Hopkins University School of Medicine, Baltimore, Maryland 21205, USA.
Woon-Kai Low
Jing Xu
Niels H Gehring
Harry C Dietz
Daniel Romo
Jun O Liu
Johns Hopkins University · USHoward Hughes Medical Institute · USTexas A&M University · USUniversity Hospital Heidelberg · DE

Funding

NF-kappaB Signaling Pathway Probed with Natural ProductsR01CA100211 · NCI · JOHNS HOPKINS UNIVERSITY · PI LIU, JUN O. · 2003 to 2007
$1.6M
NCI NIH HHS CA 100211NCI NIH HHS R01 CA100211
6 · The paper itself

Abstract

Nonsense-mediated mRNA decay (NMD) in mammalian cells is a key mechanism for the removal of mRNA containing premature stop codons and is mediated by the coordinated function of numerous proteins that dynamically associate with the exon junction complex. The information communicated by these interactions and the functional consequences from a mechanistic perspective, however, are not completely documented. Herein, we report that the natural product pateamine A (PatA) is capable of inhibiting NMD through direct interaction with eIF4AIII, which is independent of its inhibition of translation initiation. Furthermore, we have characterized the mechanisms by which PatA and cycloheximide modulate NMD. Unlike CHX, PatA was found to inhibit NMD by a novel mechanism that is independent of the phosphorylation of Up-frameshift protein 1.

Indexed as

Biological ProductsCell LineCodon, NonsenseDown-RegulationEpoxy CompoundsEukaryotic Initiation FactorsHumansMacrolidesPeptide Chain Initiation, TranslationalProtein BindingRNA, MessengerRNA StabilityThiazolesBiological ProductsCodon, NonsenseEpoxy CompoundsEukaryotic Initiation FactorsMacrolidespateamine ARNA, MessengerThiazoles

Identifiers

PMID19570977
PMCPMC2749136
OpenAlexW2079697184

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.