Evidence map›Paper›PMID 19568272›Full record

ArticleBritish journal of cancer2009

Cytoglobin is upregulated by tumour hypoxia and silenced by promoter hypermethylation in head and neck cancer.

R J Shaw, M M Omar, S Rokadiya, F A Kogera, D Lowe, G L Hall, J A Woolgar, J Homer, T Liloglou, J K Field and 1 more

Open access · hybridAbstract read
In one paragraph

Article in British journal of cancer, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
2.1field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 73 citations in OpenAlex.

  1. Review
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  5. Insights into the function of cytoglobin.Biochemical Society transactions · 2023
    Review
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  8. Article
  9. Review
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  14. Review
  15. Review
  16. Hypoxia Alters Epigenetic andFrontiers in oncology · 2020
    Article
  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

R J ShawMolecular Genetics and Oncology Group, School of Dental Sciences, University of Liverpool, Liverpool, UK. Richard.shaw@liv.ac.uk
M M Omar
S Rokadiya
F A Kogera
D Lowe
G L Hall
J A Woolgar
J Homer
T Liloglou
J K Field
J M Risk
University of Liverpool · GBAintree University Hospital · GBRoy Castle Lung Cancer Foundation · GBUniversity of Manchester · GB

Funding

Medical Research Council G9900432
6 · The paper itself

Abstract

backgroundCytoglobin (Cygb) was first described in 2002 as an intracellular globin of unknown function. We have previously shown the downregulation of cytoglobin as a key event in a familial cancer syndrome of the upper aerodigestive tract.

methodsCytoglobin expression and promoter methylation were investigated in sporadic head and neck squamous cell carcinoma (HNSCC) using a cross-section of clinical samples. Additionally, the putative mechanisms of Cygb expression in cancer were explored by subjecting HNSCC cell lines to hypoxic culture conditions and 5-aza-2-deoxycitidine treatment.

resultsIn clinically derived HNSCC samples, CYGB mRNA expression showed a striking correlation with tumour hypoxia (measured by HIF1A mRNA expression P=0.013) and consistent associations with histopathological measures of tumour aggression. CYGB expression also showed a marked negative correlation with promoter methylation (P=0.018). In the HNSCC cell lines cultured under hypoxic conditions, a trend of increasing expression of both CYGB and HIF1A with progressive hypoxia was observed. Treatment with 5-aza-2-deoxycitidine dramatically increased CYGB expression in those cell lines with greater baseline promoter methylation.

conclusionWe conclude that the CYGB gene is regulated by both promoter methylation and tumour hypoxia in HNSCC and that increased expression of this gene correlates with clincopathological measures of a tumour's biological aggression.

Indexed as

DNA MethylationGene Expression Regulation, NeoplasticCarcinoma, Squamous CellCell HypoxiaCell Line, TumorCytoglobinGene SilencingGlobinsHeLa CellsHumansHypoxia-Inducible Factor 1, alpha SubunitMouth NeoplasmsOropharyngeal NeoplasmsPromoter Regions, GeneticRNA, MessengerUp-RegulationCYGB protein, humanCytoglobinGlobinsHIF1A protein, humanHypoxia-Inducible Factor 1, alpha SubunitRNA, Messenger

Identifiers

PMID19568272
PMCPMC2713706
OpenAlexW1982318380

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.