Evidence map›Paper›PMID 19567405›Full record

ArticleHuman molecular genetics2009

Direct and indirect roles of RECQL4 in modulating base excision repair capacity.

Shepherd H Schurman, Mohammad Hedayati, ZhengMing Wang, Dharmendra K Singh, Elzbieta Speina, Yongqing Zhang, Kevin Becker, Margaret Macris, Patrick Sung, David M Wilson and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Human molecular genetics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 83 citations in OpenAlex.

  1. The Pathology of Viral Infections.Advances in experimental medicine and biology · 2026
    Review
  2. Review
  3. Article
  4. Review
  5. Article
  6. Review
  7. Review
  8. Review
  9. Article
  10. Article
  11. Molecular Mechanisms of the RECQ4 Pathogenic Mutations.Frontiers in molecular biosciences · 2021
    Review
  12. Human RecQ Helicases in DNA Double-Strand Break Repair.Frontiers in cell and developmental biology · 2021
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 2 countries.

Shepherd H SchurmanLaboratory of Molecular Gerontology, National Institute on Aging, NIH, Baltimore, MD 21224, USA.
Mohammad Hedayati
ZhengMing Wang
Dharmendra K Singh
Elzbieta Speina
Yongqing Zhang
Kevin Becker
Margaret Macris
Patrick Sung
David M Wilson
Deborah L Croteau
Vilhelm A Bohr
Laboratory of Molecular Genetics · PLInstitute of Biochemistry and Biophysics, Polish Academy of Sciences · PLYale University · US

Funding

Analysis of complex biological systems by microarray based gene expressionZICAG000616 · NIA · NATIONAL INSTITUTE ON AGING · PI DE, SUPRIYO · 2009 to 2025
$15.5M
Function of RecQ helicases in genome stabilityZIAAG000726 · NIA · NATIONAL INSTITUTE ON AGING · PI BROSH, ROBERT · 2009 to 2025
$13.1M
Roles of the RecQ Helicases BLM and RECQ5 in Genome MaintenanceR01ES015632 · NIEHS · YALE UNIVERSITY · PI SUNG, PATRICK · 2007 to 2017
$3.9M
Function of RecQ helicases in genome stabilityZ01AG000726 · NIA · NATIONAL INSTITUTE ON AGING · PI BOHR, VILHELM A · 1993 to 2008
$2.9M
Repair Mechanisms For Oxidative DNA DamageZIAAG000743 · NIA · NATIONAL INSTITUTE ON AGING · PI WILSON, DAVID · 2009 to 2015
$2.5M
REPAIR OF OXIDATIVE DNA DAMAGEZ01AG000727 · NIA · NATIONAL INSTITUTE ON AGING · PI BOHR, VILHELM A · 1994 to 2008
$1.3M
Intramural NIH HHS Z01 AG000726Intramural NIH HHS Z01 AG000727NIA NIH HHS Z01 AG000726-16NIA NIH HHS Z01 AG000727NIEHS NIH HHS R01 ES015632NIEHS NIH HHS R01ES-015632
6 · The paper itself

Abstract

RECQL4 is a human RecQ helicase which is mutated in approximately two-thirds of individuals with Rothmund-Thomson syndrome (RTS), a disease characterized at the cellular level by chromosomal instability. BLM and WRN are also human RecQ helicases, which are mutated in Bloom and Werner's syndrome, respectively, and associated with chromosomal instability as well as premature aging. Here we show that primary RTS and RECQL4 siRNA knockdown human fibroblasts accumulate more H(2)O(2)-induced DNA strand breaks than control cells, suggesting that RECQL4 may stimulate repair of H(2)O(2)-induced DNA damage. RTS primary fibroblasts also accumulate more XRCC1 foci than control cells in response to endogenous or induced oxidative stress and have a high basal level of endogenous formamidopyrimidines. In cells treated with H(2)O(2), RECQL4 co-localizes with APE1, and FEN1, key participants in base excision repair. Biochemical experiments indicate that RECQL4 specifically stimulates the apurinic endonuclease activity of APE1, the DNA strand displacement activity of DNA polymerase beta, and incision of a 1- or 10-nucleotide flap DNA substrate by Flap Endonuclease I. Additionally, RTS cells display an upregulation of BER pathway genes and fail to respond like normal cells to oxidative stress. The data herein support a model in which RECQL4 regulates both directly and indirectly base excision repair capacity.

Indexed as

DNA RepairBiocatalysisCells, CulturedDNA-(Apurinic or Apyrimidinic Site) LyaseDNA-Binding ProteinsDNA DamageDNA Polymerase betaGuanineHumansHydrogen PeroxideOligonucleotide Array Sequence AnalysisPyrimidinesRecQ HelicasesRNA, Small InterferingRothmund-Thomson SyndromeX-ray Repair Cross Complementing Protein 12,6-diamino-4-hydroxy-5-formamidopyrimidine7,8-dihydro-8-oxoguanineAPEX1 protein, humanDNA-(Apurinic or Apyrimidinic Site) LyaseDNA-Binding ProteinsDNA Polymerase betaGuanineHydrogen PeroxidePyrimidinesRecQ HelicasesRECQL4 protein, humanRNA, Small InterferingX-ray Repair Cross Complementing Protein 1XRCC1 protein, human

Identifiers

PMID19567405
PMCPMC2729667
OpenAlexW2159157712

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.