Evidence map›Paper›PMID 19567404›Full record

ArticleHuman molecular genetics2009

Identification of novel susceptibility loci for Guam neurodegenerative disease: challenges of genome scans in genetic isolates.

Weiva Sieh, Yoonha Choi, Nicola H Chapman, Ulla-Katrina Craig, Ellen J Steinbart, Joseph H Rothstein, Kiyomitsu Oyanagi, Ralph M Garruto, Thomas D Bird, Douglas R Galasko and 2 more

Abstract read
In one paragraph

Article in Human molecular genetics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Tau filaments from amyotrophic lateral sclerosis/parkinsonism-dementia complex adopt the CTE fold.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  5. Review
  6. Review
  7. Article
  8. Review
  9. Article
  10. TDP-43 Proteinopathy and ALS: Insights into Disease Mechanisms and Therapeutic Targets.Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics · 2015
    Review
  11. Review
  12. Article
  13. Inherited and somatic mitochondrial DNA mutations in Guam amyotrophic lateral sclerosis and parkinsonism-dementia.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2011
    Article
  14. Article
  15. Article
  16. TDP-43 proteinopathy and motor neuron disease in chronic traumatic encephalopathy.Journal of neuropathology and experimental neurology · 2010
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Weiva SiehDivision of Medical Genetics, Department of Medicine, University of Washington, Seattle, WA 98195, USA.
Yoonha Choi
Nicola H Chapman
Ulla-Katrina Craig
Ellen J Steinbart
Joseph H Rothstein
Kiyomitsu Oyanagi
Ralph M Garruto
Thomas D Bird
Douglas R Galasko
Gerard D Schellenberg
Ellen M Wijsman

Funding

THERAPEUTIC EFFECTS OF INTRA-NASAL INSULIN DETEMIRP50AG005136 · NIA · UNIVERSITY OF WASHINGTON · PI JAYADEY, SUMAN · 1985 to 2019
$57.2M
PREVALENCE /INCIDENCE /RISK FACTORS FOR DEMENTIA ON GUAMP01AG014382 · NIA · UNIVERSITY OF WASHINGTON · PI PERL, DANIEL P · 1997 to 2006
$13.4M
Methods for the Genetic Epidemiology of Complex TraitsR37GM046255 · NIGMS · UNIVERSITY OF WASHINGTON · PI THOMPSON, ELIZABETH ALISON · 2008 to 2017
$4.2M
Genomic Analysis of Alzheimer's Disease GenesR37AG011762 · NIA · UNIVERSITY OF WASHINGTON · PI SCHELLENBERG, GERARD DAVID · 2004 to 2013
$2.7M
THE GENETIC EPIDEMIOLOGY OF COMPLEX TRAITSR01GM046255 · NIGMS · UNIVERSITY OF WASHINGTON · PI THOMPSON, ELIZABETH ALISON · 1991 to 2007
$2.7M
GENOMIC ANALYSIS OF ALZHEIMERS DISEASE GENESR01AG011762 · NIA · UNIVERSITY OF WASHINGTON · PI SCHELLENBERG, GERARD DAVID · 1994 to 2002
$689k
NIA NIH HHS AG05136NIA NIH HHS AG11762NIA NIH HHS AG14382NIA NIH HHS P01 AG014382NIA NIH HHS P50 AG005136NIA NIH HHS R01 AG011762NIA NIH HHS R37 AG011762NIGMS NIH HHS GM46255NIGMS NIH HHS R01 GM046255NIGMS NIH HHS R37 GM046255
6 · The paper itself

Abstract

Amyotrophic lateral sclerosis/parkinsonism-dementia complex (ALS/PDC) is a fatal neurodegenerative disease found in the Chamorro people of Guam and other Pacific Island populations. The etiology is unknown, although both genetic and environmental factors appear important. To identify loci for ALS/PDC, we conducted both genome-wide linkage and association analyses, using approximately 400 microsatellite markers, in the largest sample assembled to date, comprising a nearly complete sample of all living and previously sampled deceased cases. A single, large, complex pedigree was ascertained from a village on Guam, with smaller families and a case-control sample ascertained from the rest of Guam by population-based neurological screening and archival review. We found significant evidence for two regions with novel ALS/PDC loci on chromosome 12 and supportive evidence for the involvement of the MAPT region on chromosome 17. D12S1617 on 12p gave the strongest evidence of linkage (maximum LOD score, Z(max) = 4.03) in our initial scan, with additional support in the complete case-control sample in the form of evidence of allelic association at this marker and another nearby marker. D12S79 on 12q also provided significant evidence of linkage (Z(max) = 3.14) with support from flanking markers. Our results suggest that ALS/PDC may be influenced by as many as three loci, while illustrating challenges that are intrinsic in genetic analyses of isolated populations, as well as analytical strategies that are useful in this context. Elucidation of the genetic basis of ALS/PDC should improve our understanding of related neurodegenerative disorders including Alzheimer disease, Parkinson disease, frontotemporal dementia and ALS.

Indexed as

Genetic Predisposition to DiseaseGenome-Wide Association StudyAdultAgedCase-Control StudiesChromosomes, Human, Pair 12Chromosomes, Human, Pair 17FemaleGenetic LinkageGuamHumansMaleMiddle AgedNative Hawaiian or Pacific IslanderNeurodegenerative DiseasesPedigree

Identifiers

PMID19567404
PMCPMC2742398

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.