Evidence map›Paper›PMID 19566921›Full record

ArticleGenome biology2009

Genomic linkage map of the human blood fluke Schistosoma mansoni.

Charles D Criscione, Claudia L L Valentim, Hirohisa Hirai, Philip T LoVerde, Timothy J C Anderson

Abstract read
In one paragraph

Article in Genome biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed.

  1. Direct measurement ofbioRxiv : the preprint server for biology · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Schistosomiasis.Advances in experimental medicine and biology · 2024
    Review
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  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Charles D CriscioneDepartment of Biology, Texas A&M University, College Station, TX 77843, USA. ccriscione@mail.bio.tamu.edu
Claudia L L Valentim
Hirohisa Hirai
Philip T LoVerde
Timothy J C Anderson

Funding

SEQUENCING 12 MB OF THE SCHISTOSOMA MANSONI GENOMEU01AI048828 · NIAID · INSTITUTE FOR GENOMIC RESEARCH · PI EL-SAYED, NAJIB M. · 2001 to 2002
$4.9M
Training to Enhance Schistosomiasis Research in BrazilD43TW006580 · FIC · TEXAS BIOMEDICAL RESEARCH INSTITUTE · PI LOVERDE, PHILIP T · 2003 to 2007
$726k
A Linkage Map for Schistosoma mansoniR21AI072704 · NIAID · TEXAS BIOMEDICAL RESEARCH INSTITUTE · PI ANDERSON, TIM J · 2007 to 2008
$466k
MOLECULAR AND BIOCHEMICAL GENETICS LABORATORY RENOVATIONC06RR013556 · NCRR · SOUTHWEST FOUNDATION FOR BIOMEDICAL RES · PI SHADE, ROBERT E · 1998 to 1998
–
TICK SYSTEMATICS ON A GLOBAL BASISR01AI030026 · NIAID · GEORGIA SOUTHERN UNIVERSITY · PI KEIRANS, JAMES E · 1990 to 1994
–
FIC NIH HHS D43 TW006580FIC NIH HHS D43TW006580NCRR NIH HHS C06 RR013556NIAID NIH HHS AI30026NIAID NIH HHS N01 AI030026NIAID NIH HHS R21 AI072704NIAID NIH HHS U01 AI048828NIAID NIH HHS U01-AI48828
6 · The paper itself

Abstract

backgroundSchistosoma mansoni is a blood fluke that infects approximately 90 million people. The complete life cycle of this parasite can be maintained in the laboratory, making this one of the few experimentally tractable human helminth infections, and a rich literature reveals heritable variation in important biomedical traits such as virulence, host-specificity, transmission and drug resistance. However, there is a current lack of tools needed to study S. mansoni's molecular, quantitative, and population genetics. Our goal was to construct a genetic linkage map for S. mansoni, and thus provide a new resource that will help stimulate research on this neglected pathogen.

resultsWe genotyped grandparents, parents and 88 progeny to construct a 5.6 cM linkage map containing 243 microsatellites positioned on 203 of the largest scaffolds in the genome sequence. The map allows 70% of the estimated 300 Mb genome to be ordered on chromosomes, and highlights where scaffolds have been incorrectly assembled. The markers fall into eight main linkage groups, consistent with seven pairs of autosomes and one pair of sex chromosomes, and we were able to anchor linkage groups to chromosomes using fluorescent in situ hybridization. The genome measures 1,228.6 cM. Marker segregation reveals higher female recombination, confirms ZW inheritance patterns, and identifies recombination hotspots and regions of segregation distortion.

conclusionsThe genetic linkage map presented here is the first for S. mansoni and the first for a species in the phylum Platyhelminthes. The map provides the critical tool necessary for quantitative genetic analysis, aids genome assembly, and furnishes a framework for comparative flatworm genomics and field-based molecular epidemiological studies.

Indexed as

Chromosome MappingAnimalsChromosome SegregationFemaleGenetic LinkageGenetic MarkersGenome, HelminthHumansIn Situ Hybridization, FluorescenceLife Cycle StagesMaleRecombination, GeneticSchistosoma mansoniSex ChromosomesGenetic Markers

Identifiers

PMID19566921
PMCPMC2718505

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.