Evidence map›Paper›PMID 19563902›Full record

ArticleFungal genetics and biology : FG & B2009

HdaA, a class 2 histone deacetylase of Aspergillus fumigatus, affects germination and secondary metabolite production.

Inhyung Lee, Jee-Hwan Oh, E Keats Shwab, Taylor R T Dagenais, David Andes, Nancy P Keller

Open access · greenAbstract read
In one paragraph

Article in Fungal genetics and biology : FG & B, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 70 papers.

0numbers the graph read from it
0cells of the map it votes in
70citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

70 citing papers in PubMed, 143 citations in OpenAlex.

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  14. The histone code of the fungal genusMicrobial genomics · 2022
    Article
  15. Review
  16. Review
  17. TheJournal of fungi (Basel, Switzerland) · 2022
    Article
  18. Review
  19. Article
  20. Article

10 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Inhyung LeeDepartment of Foods and Nutrition, Kookmin University, Seoul, Republic of Korea.
Jee-Hwan Oh
E Keats Shwab
Taylor R T Dagenais
David Andes
Nancy P Keller
University of Wisconsin–Madison · USKookmin University · KR

Funding

Mechanisms of an Aspergillus fumigatus virulence mutantR01AI065728 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI KELLER, NANCY P · 2006 to 2017
$3.6M
NIAID NIH HHS R01 AI065728NIAID NIH HHS R01 AI065728-01A1
6 · The paper itself

Abstract

Histone deacetylases (HDACs) play an important role in regulation of gene expression through histone modifications. Here we show that the Aspergillus fumigatus HDAC HdaA is involved in regulation of secondary metabolite production and is required for normal germination and vegetative growth. Deletion of the hdaA gene increased the production of several secondary metabolites but decreased production of gliotoxin whereas over-expression hdaA increased production of gliotoxin. RT-PCR analysis of 14 nonribosomal peptide synthases indicated HdaA regulation of up to nine of them. A mammalian cell toxicity assay indicated increased activity in the over-expression strain. Neither mutant affected virulence of the fungus as measured by macrophage engulfment of conidia or virulence in a neutropenic mouse model.

Indexed as

AnimalsAspergillosisAspergillus fumigatusFungal ProteinsGene DeletionGene DosageGene Expression ProfilingGene Expression Regulation, FungalHistone DeacetylasesMiceVirulenceFungal ProteinsHistone Deacetylases

Identifiers

PMID19563902
PMCPMC2755195
OpenAlexW2055386224

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.