ArticleTheoretical biology & medical modelling2009
Models of epidemics: when contact repetition and clustering should be included.
Article in Theoretical biology & medical modelling, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers.
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Who cites it
62 citing papers in PubMed.
- Household crowding, social mixing patterns and respiratory symptoms in seven countries of the African meningitis belt.PloS one · 2014Trial
- Positive network assortativity of influenza vaccination at a high school: implications for outbreak risk and herd immunity.PloS one · 2014Trial
- A comparison of contact patterns derived from the population structure in agent-based models and empirical contact survey data.PLoS computational biology · 2026Article
- Preserving friendships in school contacts: An algorithm to construct synthetic temporal networks for epidemic modelling.PLoS computational biology · 2024Article
- Repetition in social contacts: implications in modelling the transmission of respiratory infectious diseases in pre-pandemic and pandemic settings.Proceedings. Biological sciences · 2024Article
- Intervention effect of targeted workplace closures may be approximated by single-layered networks in an individual-based model of COVID-19 control.Scientific reports · 2024Article
- An algorithm to build synthetic temporal contact networks based on close-proximity interactions data.PLoS computational biology · 2024Article
- A new mixed agent-based network and compartmental simulation framework for joint modeling of related infectious diseases- application to sexually transmitted infections.Infectious Disease Modelling · 2023Article
- Joint modeling HIV and HPV using a new hybrid agent-based network and compartmental simulation technique.PloS one · 2023Article
- Modeling the impact of the habituation effect on information spreading processes with repeated contacts under an SI model.PloS one · 2023Article
- Habituation effect in social networks as a potential factor silently crushing influence maximisation efforts.Scientific reports · 2021Article
- A reinforcement learning model to inform optimal decision paths for HIV elimination.Mathematical biosciences and engineering : MBE · 2021Article
- Agent-based evolving network modeling: a new simulation method for modeling low prevalence infectious diseases.Health care management science · 2021Article
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- A multi-feature hybrid classification data mining technique for human-emotion.BioData mining · 2021Article
- Progression and transmission of HIV (PATH 4.0)-A new agent-based evolving network simulation for modeling HIV transmission clusters.Mathematical biosciences and engineering : MBE · 2021Article
- Parameter Space Exploration in Pedestrian Queue Design to Mitigate Infectious Disease Spread.Journal of the Indian Institute of Science · 2021Review
- Population density and basic reproductive number of COVID-19 across United States counties.PloS one · 2021Article
- Modeling epidemic spreading through public transit using time-varying encounter network.Transportation research. Part C, Emerging technologies · 2021Article
- Modelling digital and manual contact tracing for COVID-19. Are low uptakes and missed contacts deal-breakers?PloS one · 2021Article
2 more citing papers are in PubMed but not listed here.
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3 authors.
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No grant is acknowledged in the PubMed record.
Abstract
backgroundThe spread of infectious disease is determined by biological factors, e.g. the duration of the infectious period, and social factors, e.g. the arrangement of potentially contagious contacts. Repetitiveness and clustering of contacts are known to be relevant factors influencing the transmission of droplet or contact transmitted diseases. However, we do not yet completely know under what conditions repetitiveness and clustering should be included for realistically modelling disease spread.
methodsWe compare two different types of individual-based models: One assumes random mixing without repetition of contacts, whereas the other assumes that the same contacts repeat day-by-day. The latter exists in two variants, with and without clustering. We systematically test and compare how the total size of an outbreak differs between these model types depending on the key parameters transmission probability, number of contacts per day, duration of the infectious period, different levels of clustering and varying proportions of repetitive contacts.
resultsThe simulation runs under different parameter constellations provide the following results: The difference between both model types is highest for low numbers of contacts per day and low transmission probabilities. The number of contacts and the transmission probability have a higher influence on this difference than the duration of the infectious period. Even when only minor parts of the daily contacts are repetitive and clustered can there be relevant differences compared to a purely random mixing model.
conclusionWe show that random mixing models provide acceptable estimates of the total outbreak size if the number of contacts per day is high or if the per-contact transmission probability is high, as seen in typical childhood diseases such as measles. In the case of very short infectious periods, for instance, as in Norovirus, models assuming repeating contacts will also behave similarly as random mixing models. If the number of daily contacts or the transmission probability is low, as assumed for MRSA or Ebola, particular consideration should be given to the actual structure of potentially contagious contacts when designing the model.
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