Evidence map›Paper›PMID 19563107›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2009

Chromatin immunoprecipitation of replication factors moving with the replication fork.

Jordan B Rapp, Alison B Ansbach, Chiaki Noguchi, Eishi Noguchi

Open access · greenAbstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Chromatin immunoprecipitation to detect DNA replication and repair factors.Methods in molecular biology (Clifton, N.J.) · 2015
    Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Jordan B RappDepartment of Biochemistry and Molecular Biology, Drexel University College of Medicine, Philadelphia, PA, USA.
Alison B Ansbach
Chiaki Noguchi
Eishi Noguchi
Drexel University · US

Funding

Studies of the Swi1-Swi3 Replication Fork Protection ComplexR01GM077604 · NIGMS · DREXEL UNIVERSITY · PI NOGUCHI, EISHI · 2008 to 2012
$1.6M
NIGMS NIH HHS R01 GM077604
6 · The paper itself

Abstract

Replication of chromosomes involves a variety of replication proteins including DNA polymerases, DNA helicases, and other accessory factors. Many of these proteins are known to localize at replication forks and travel with them as components of the replisome complex. Other proteins do not move with replication forks but still play an essential role in DNA replication. Therefore, in order to understand the mechanisms of DNA replication and its controls, it is important to examine localization of each replication factor. Here we describe a chromatin immunoprecipitation (ChIP) method to locate a replication factor at the replication fork. Defining the localization of replication proteins should provide important insight into mechanistic understanding of the regulation of the DNA replication process.

Indexed as

DNA ReplicationBase SequenceChromatin ImmunoprecipitationCross-Linking ReagentsDNADNA-Binding ProteinsDNA, FungalDNA PrimersPolymerase Chain ReactionReplication OriginSchizosaccharomycesSchizosaccharomyces pombe ProteinsCross-Linking ReagentsDNADNA-Binding ProteinsDNA, FungalDNA PrimersSchizosaccharomyces pombe Proteins

Identifiers

PMID19563107
PMCPMC3571701
OpenAlexW111984938

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.